Miyakogusa Predicted Gene
- Lj1g3v1019020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1019020.1 tr|A9TWI7|A9TWI7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_172369,29.3,0.0000000000001,SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,NODE_28861_length_1541_cov_106.963661.path2.1
(607 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS350521 similar to UniRef100_A7QEZ2 Cluster: Chromosom... 993 0.0
gnl|LJGI|AV412490 similar to UniRef100_Q9AKP3 Cluster: Arp2/3 co... 70 2e-11
>gnl|LJGI|FS350521 similar to UniRef100_A7QEZ2 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 681
Score = 993 bits (501), Expect = 0.0
Identities = 501/501 (100%)
Strand = Plus / Minus
Query: 107 aagcaaggagcaaggactttgagttattagttctaattttaacttctgggattctcactt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagcaaggagcaaggactttgagttattagttctaattttaacttctgggattctcactt 622
Query: 167 ctatcatgactgattcttcctatggtactactttctcttatctctgctatttggttggaa 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctatcatgactgattcttcctatggtactactttctcttatctctgctatttggttggaa 562
Query: 227 acttgtccaatcaatgtcaacaagctttggtgccaggtagaggatttgccaatagtgaag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttgtccaatcaatgtcaacaagctttggtgccaggtagaggatttgccaatagtgaag 502
Query: 287 atcaagaaaatgaattgcttcttttcagaaggatccttttcccgtattttatatcggaac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaagaaaatgaattgcttcttttcagaaggatccttttcccgtattttatatcggaac 442
Query: 347 ttgtgaaggctgatcaacatgttcttgctggatttcttgtcacgaaatttatgcacacta 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtgaaggctgatcaacatgttcttgctggatttcttgtcacgaaatttatgcacacta 382
Query: 407 atgagtcactgagcctcattaacattgccggggccagtcttaataggtatctggaaaagc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagtcactgagcctcattaacattgccggggccagtcttaataggtatctggaaaagc 322
Query: 467 agctccacatgctacaaggcaacgagttccatgtcgagaagacatgtaaaacattgaaga 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctccacatgctacaaggcaacgagttccatgtcgagaagacatgtaaaacattgaaga 262
Query: 527 atactattagcaggttgagaggcaaactgagcaatttgattcaatccacattgcctttgc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atactattagcaggttgagaggcaaactgagcaatttgattcaatccacattgcctttgc 202
Query: 587 tttctgcaagtgttagttgaa 607
|||||||||||||||||||||
Sbjct: 201 tttctgcaagtgttagttgaa 181
>gnl|LJGI|AV412490 similar to UniRef100_Q9AKP3 Cluster: Arp2/3 complex-activating
protein rickA; n=1; Rickettsia montanensis|Rep: Arp2/3,
partial (2%)
Length = 361
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 490 gagttccatgtcgagaagacatgtaaaacattgaagaatactattagcaggttga 544
||||||||||| ||||||||||||| |||| ||||||||||| |||||| |||||
Sbjct: 105 gagttccatgttgagaagacatgtagaacactgaagaatactgttagcaagttga 51