Miyakogusa Predicted Gene
- Lj1g3v1008810.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1008810.2 Non Chatacterized Hit- tr|I1NH08|I1NH08_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13293
PE,67.19,0.00000000000001,RRM_1,RNA recognition motif domain; no
description,Nucleotide-binding, alpha-beta plait; seg,NULL;
R,CUFF.26661.2
(702 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61636 similar to UniRef100_A7QEZ7 Cluster: Chromosome... 1392 0.0
gnl|LJGI|AV409118 similar to UniRef100_Q6IVX8 Cluster: Basic chi... 410 e-114
>gnl|LJGI|TC61636 similar to UniRef100_A7QEZ7 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1462
Score = 1392 bits (702), Expect = 0.0
Identities = 702/702 (100%)
Strand = Plus / Plus
Query: 1 atgtccgacgcttattggagatacgccgccgaatcccgccacaacccctccgccatcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtccgacgcttattggagatacgccgccgaatcccgccacaacccctccgccatcgcc 240
Query: 61 gccaagcgcgcccgttccgattacgatgtctctggcgttcatgacatgcccggttactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccaagcgcgcccgttccgattacgatgtctctggcgttcatgacatgcccggttactat 300
Query: 121 ccccatgatgatgatagaggagggctgcgagtaattagagatactgaatcccttgatgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccccatgatgatgatagaggagggctgcgagtaattagagatactgaatcccttgatgcg 360
Query: 181 tcctatgagcgttacctccgtagtgcgcaagtttcctcttttggtgagggacagtctacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcctatgagcgttacctccgtagtgcgcaagtttcctcttttggtgagggacagtctacc 420
Query: 241 agaaccatccgtgggcgacttcccagtcattcctttgatgattcacatgtcacaagtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaaccatccgtgggcgacttcccagtcattcctttgatgattcacatgtcacaagtatt 480
Query: 301 ggtggagtagaccgaggaccaagtgcaaaggaaaaaatcctgggattaagtagtggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtggagtagaccgaggaccaagtgcaaaggaaaaaatcctgggattaagtagtggaaga 540
Query: 361 cctgaccattctcttccacctgatgctaccagtacactgtttgtagagggtttaccaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgaccattctcttccacctgatgctaccagtacactgtttgtagagggtttaccaaca 600
Query: 421 aactgctcgagacgggaagtagctcatattttccgtccttttgttggctacaaggaagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aactgctcgagacgggaagtagctcatattttccgtccttttgttggctacaaggaagtc 660
Query: 481 agacttgttagcaaggaatcaagacaacctgggggtgatccattggtactttgttttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agacttgttagcaaggaatcaagacaacctgggggtgatccattggtactttgttttgtt 720
Query: 541 gattttgagagtccagctcatgctgcaactgccaaggatgcattgcagggttacaaattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gattttgagagtccagctcatgctgcaactgccaaggatgcattgcagggttacaaattt 780
Query: 601 gacgaacttgaccgcaactcggccaatttaaggttccaatttgctcgctatcctggtgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gacgaacttgaccgcaactcggccaatttaaggttccaatttgctcgctatcctggtgca 840
Query: 661 aggtccggtggtggtggtgggtttcgtgggaagcgttgaatt 702
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aggtccggtggtggtggtgggtttcgtgggaagcgttgaatt 882
>gnl|LJGI|AV409118 similar to UniRef100_Q6IVX8 Cluster: Basic chitinase 1-1; n=1;
Nepenthes khasiana|Rep: Basic chitinase 1-1 - Nepenthes
khasiana, partial (5%)
Length = 360
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1 atgtccgacgcttattggagatacgccgccgaatcccgccacaacccctccgccatcgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atgtccgacgcttattggagatacgccgccgaatcccgccacaacccctccgccatcgcc 114
Query: 61 gccaagcgcgcccgttccgattacgatgtctctggcgttcatgacatgcccggttactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gccaagcgcgcccgttccgattacgatgtctctggcgttcatgacatgcccggttactat 174
Query: 121 ccccatgatgatgatagaggagggctgcgagtaattagagatactgaatcccttgatgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ccccatgatgatgatagaggagggctgcgagtaattagagatactgaatcccttgatgcg 234
Query: 181 tcctatgagcgttacctccgtagtgcg 207
|||||||||||||||||||||||||||
Sbjct: 235 tcctatgagcgttacctccgtagtgcg 261