Miyakogusa Predicted Gene

Lj1g3v0987680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0987680.1 tr|G7JMY6|G7JMY6_MEDTR Peptide transporter PTR1
OS=Medicago truncatula GN=MTR_4g015080 PE=3 SV=1,84.5,0,MFS general
substrate transporter,Major facilitator superfamily domain, general
substrate transporte,CUFF.26637.1
         (781 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071089 similar to UniRef100_O48542 Cluster: Peptide t...   194   6e-49

>gnl|LJGI|BP071089 similar to UniRef100_O48542 Cluster: Peptide transporter; n=1;
           Hordeum vulgare|Rep: Peptide transporter - Hordeum
           vulgare (Barley), partial (15%)
          Length = 393

 Score =  194 bits (98), Expect = 6e-49
 Identities = 215/254 (84%)
 Strand = Plus / Minus

                                                                       
Query: 524 aggcacctgatgctatgagaagtttgtgtgtggctctctcactcacaactaatgccatag 583
           |||| ||||||||||||||||||||||||   |||||||||||||||||||||||| | |
Sbjct: 384 aggcgcctgatgctatgagaagtttgtgttctgctctctcactcacaactaatgccttgg 325

                                                                       
Query: 584 gaaattacataagcactctgctcgttaccattgtgacaaaagttaccacaagggatggaa 643
           |||||||  | |||||| |||| ||||  ||||| || ||||| ||||||||   |||||
Sbjct: 324 gaaattatgtgagcactttgcttgttattattgtaacgaaagtcaccacaagcagtggaa 265

                                                                       
Query: 644 aacttggttggattccagataacctgaatagaggccatcttgactatttctattggctct 703
             ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| |
Sbjct: 264 gtcttggttggattccagataacatgaatagaggccatcttgactacttctactggcttt 205

                                                                       
Query: 704 tgtccattctcagccttctaaacttccacgtgtttctctggattgcaaagaggtataggt 763
           || || |||| ||| | || |||||||  |||| |||||||||||| ||||||||||  |
Sbjct: 204 tgaccgttctgagcttgcttaacttcctggtgtatctctggattgctaagaggtatacat 145

                         
Query: 764 acaagaaagtggca 777
           |||| || ||||||
Sbjct: 144 acaaaaaggtggca 131