Miyakogusa Predicted Gene

Lj1g3v0987670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0987670.1 Non Chatacterized Hit- tr|I1KKB0|I1KKB0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4743 PE=,88.41,0,no
description,NULL; MFS general substrate transporter,Major facilitator
superfamily domain, general,CUFF.26636.1
         (534 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595323 similar to UniRef100_A7PP13 Cluster: Chromosom...   186   9e-47
gnl|LJGI|TC65399 similar to UniRef100_A7NYK8 Cluster: Chromosome...    72   4e-12
gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome...    72   4e-12

>gnl|LJGI|DC595323 similar to UniRef100_A7PP13 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 232

 Score =  186 bits (94), Expect = 9e-47
 Identities = 192/221 (86%), Gaps = 4/221 (1%)
 Strand = Plus / Plus

                                                                       
Query: 19  tgccatccaacatcagcacaaactgcagcttgctttatagcgctccatttgattgctctt 78
           ||||||||||| |||| |||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 5   tgccatccaacgtcaggacaaactgcagcttgctttatagcactctacttgattgctctt 64

                                                                       
Query: 79  ggaactggcggtatcaaaccatgtgtctcatcttttgatgcggaccaatttgatgaagca 138
           |||||||| |||||||||||||||||||| ||||||| ||| ||||||||| || |  ||
Sbjct: 65  ggaactggtggtatcaaaccatgtgtctcgtcttttggtgctgaccaatttcatca--ca 122

                                                                       
Query: 139 -gatgagaaagaaaggaaaagcaagagctctttcttcaactggttttacttctcaattaa 197
            ||||| |  || ||||||| ||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 123 tgatga-agtgacaggaaaaacaacagctctttcttcaattggttttacttctcaatcaa 181

                                                    
Query: 198 cattggtgcgctcgttgcttcatcagtattggtttggatac 238
            ||||| || ||||||||||| || || || ||||||||||
Sbjct: 182 tattggcgcactcgttgcttcttctgtgttagtttggatac 222


>gnl|LJGI|TC65399 similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 722

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 159 caagagctctttcttcaactggttttacttctcaattaacattggtgcgctcgttgcttc 218
           |||||| ||||||||||||||||| || |||||||| ||||||||||| ||| |||||||
Sbjct: 643 caagagttctttcttcaactggttctatttctcaatcaacattggtgctctcattgcttc 702


>gnl|LJGI|TC60542 similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 2040

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 159 caagagctctttcttcaactggttttacttctcaattaacattggtgcgctcgttgcttc 218
           |||||| ||||||||||||||||| || |||||||| ||||||||||| ||| |||||||
Sbjct: 699 caagagttctttcttcaactggttctatttctcaatcaacattggtgctctcattgcttc 758