Miyakogusa Predicted Gene

Lj1g3v0984520.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0984520.1 tr|F7YAR9|F7YAR9_MESOW Multi-sensor signal
transduction histidine kinase OS=Mesorhizobium opportunis,41.3,2.5,
,CUFF.26630.1
         (385 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80794 similar to UniRef100_Q8GTX9 Cluster: Cell cycle...   291   2e-78
gnl|LJGI|FS322515 similar to UniRef100_A4CSN4 Cluster: Preprotei...   268   2e-71
gnl|LJGI|TC61210 similar to UniRef100_Q1HTQ5 Cluster: C8R; n=1; ...   153   9e-37
gnl|LJGI|TC66572                                                      100   1e-20

>gnl|LJGI|TC80794 similar to UniRef100_Q8GTX9 Cluster: Cell cycle control crn
           (Crooked neck) protein-like; n=1; Arabidopsis
           thaliana|Rep: Cell cycle control crn (Crooked neck)
           protein-like - Arabidopsis thaliana (Mouse-ear cress),
           partial (6%)
          Length = 747

 Score =  291 bits (147), Expect = 2e-78
 Identities = 206/226 (91%), Gaps = 6/226 (2%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagtgtgcaacaattctggggttaagcatgatcaagatgattgcttccaagttcttagga 70
           ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||
Sbjct: 522 aagtgtgcaacaattctggagttaagcatgatcgagatgattgcttccaaattctaagga 581

                                                                       
Query: 71  tatgtaggg------gtatcattgcaatgttccatgaacatgatgtcttagttactccca 124
           ||||||  |      |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tatgtactgaccttggtatcattgcaatgttccatgaacatgatgtcttagttactccca 641

                                                                       
Query: 125 aacaagcaaagttctctcccccctttagtgatttggacataactggagaggatggtgaga 184
           |||| ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||
Sbjct: 642 aacaggcaaagttctctcccccctttagtgagctggacataactgaagaggatggtgaga 701

                                                         
Query: 185 ttagccttaatctgaatgttgataaaagtgttttggctggtagcaa 230
           ||||||||||||||| || ||||||||||| ||| |||||||||||
Sbjct: 702 ttagccttaatctgactggtgataaaagtgctttagctggtagcaa 747


>gnl|LJGI|FS322515 similar to UniRef100_A4CSN4 Cluster: Preprotein translocase SecY;
           n=1; Synechococcus sp. WH 7805|Rep: Preprotein
           translocase, partial (2%)
          Length = 778

 Score =  268 bits (135), Expect = 2e-71
 Identities = 207/230 (90%), Gaps = 7/230 (3%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagtgtgcaacaattctggggttaagcatgatcaagatgattgcttccaagttcttagga 70
           ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||
Sbjct: 550 aagtgtgcaacaattctagggttaagcatgaccgagatgattgcttccaaattcttagga 609

                                                                       
Query: 71  tatgtagg------ggtatcattgcaatgttccatgaacatgatgtcttagttactccca 124
           ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tatgtactaaccttggtatcattgcaatgttccatgaacatgatgtcttagttactccca 669

                                                                       
Query: 125 aacaagcaaagttctctcccccctttagtgatttggacataactggagaggatggtgaga 184
           |||| |||||||||||| |||||||||||||  |||||||||||| ||||||||||||||
Sbjct: 670 aacaggcaaagttctct-ccccctttagtgagatggacataactgaagaggatggtgaga 728

                                                             
Query: 185 ttagccttaatctgaatgttgataaaagtgttttggctggtagcaatgca 234
           ||||||||||| ||| || ||| |||||||  ||||||||||||||||||
Sbjct: 729 ttagccttaatgtgactggtgaaaaaagtgcattggctggtagcaatgca 778


>gnl|LJGI|TC61210 similar to UniRef100_Q1HTQ5 Cluster: C8R; n=1; Squirrelpox
           virus|Rep: C8R - Squirrelpox virus, partial (6%)
          Length = 817

 Score =  153 bits (77), Expect = 9e-37
 Identities = 101/109 (92%)
 Strand = Plus / Plus

                                                                       
Query: 273 gatagactttgaatcagatgaagaagatgatgttcgacttgctagtagggatgagggtac 332
           |||||||||||||||||||||||||||||||| | || ||||| |||||||||| |||||
Sbjct: 1   gatagactttgaatcagatgaagaagatgatgctggatttgctggtagggatgatggtac 60

                                                            
Query: 333 ttttgcaaagatcaatcctctctctaatatggcatgtgatgctaatggg 381
           |||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 61  ttttgcaaagatcagtcctctctctgatatggcctgtgatgctaatggg 109


>gnl|LJGI|TC66572 
          Length = 817

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 308 gacttgctagtagggatgagggtacttttgcaaagatcaatcctctctctaatatggcat 367
           |||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||  
Sbjct: 6   gacttgctggtagggatgatggtacttttgcaaagattagtcctctctctaatatggccc 65

                         
Query: 368 gtgatgctaatggg 381
           ||||||||||||||
Sbjct: 66  gtgatgctaatggg 79