Miyakogusa Predicted Gene
- Lj1g3v0984440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0984440.1 tr|H8WVC6|H8WVC6_LOTJA E3 ubiquitin ligase
OS=Lotus japonicus GN=SINA4 PE=2 SV=1,99.69,0,Sina,Seven-in-absentia
protein, TRAF-like domain; ZF_RING_2,Zinc finger, RING-type;
ZF_SIAH,Zinc fin,CUFF.26624.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n... 1925 0.0
gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n... 264 9e-70
gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n... 145 6e-34
gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n... 56 4e-07
>gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n=1; Medicago
truncatula|Rep: SINA4 - Medicago truncatula (Barrel
medic), complete
Length = 1635
Score = 1925 bits (971), Expect = 0.0
Identities = 974/975 (99%)
Strand = Plus / Plus
Query: 1 atggacttggacagcatcgagtgcgtgtcatcatctgatggcatggatgaggatgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atggacttggacagcatcgagtgcgtgtcatcatctgatggcatggatgaggatgagatc 399
Query: 61 cacgcccaccatcactctgagttttcttcaacgaaggctcgcaatggaggaggcaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacgcccaccatcactctgagttttcttcaacgaaggctcgcaatggaggaggcaacaat 459
Query: 121 aacaacgccgccatgggtcccaccgccattactccggcgaccagcgtccacgagttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aacaacgccgccatgggtcccaccgccattactccggcgaccagcgtccacgagttgctg 519
Query: 181 gaatgccctgtatgtaccaattcaatgtacccaccaattcatcagtgccacaatggccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaatgccctgtatgtaccaattcaatgtacccaccaattcatcagtgccacaatggccac 579
Query: 241 acattgtgttcgacgtgtaaaacaagggtgcacaaccgatgtcccacttgtagacaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acattgtgttcgacgtgtaaaacaagggtgcacaaccgatgtcccacttgtagacaagag 639
Query: 301 cttggggatattaggtgtctagcactggagaaggtggctgaatcacttgagttaccttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cttggggatattaggtgtctagcactggagaaggtggctgaatcacttgagttaccttgc 699
Query: 361 aagtactactcccttggatgtccagaaatctttccatactacagcaagcttaagcatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aagtactactcccttggatgtccagaaatctttccatactacagcaagcttaagcatgag 759
Query: 421 acaatatgcaatttcagaccatatagttgtccttatgcgggatccgagtgttctgttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acaatatgcaatttcagaccatatagttgtccttatgcgggatccgagtgttctgttgtc 819
Query: 481 ggggatattcccttcctcgttgctcacttgagggatgaccataaggtggacatgcacacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ggggatattcccttcctcgttgctcacttgagggatgaccataaggtggacatgcacacg 879
Query: 541 ggatgcacgttcaaccatcgttatgtgaagtcaaatccccgtgaagtagagaatgcaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ggatgcacgttcaaccatcgttatgtgaagtcaaatccccgtgaagtagagaatgcaacc 939
Query: 601 tggatgctcacagtatttcattgttttggccaatatttctgcctgcattttgaagctttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 tggatgctcacagtatttcattgttttggccaatatttctgcctgcattttgaagctttc 999
Query: 661 cagcttggcatggcccccgtttacatggcattccttcgtttcatgggcgatgagaatgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 cagcttggcatggcccccgtttacatggcattccttcgtttcatgggcgatgagaatgag 1059
Query: 721 gctcggaattatagctatagcctagaggttggggccaatggcaggaagctaatctgggag 780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 gctcggaattatagttatagcctagaggttggggccaatggcaggaagctaatctgggag 1119
Query: 781 ggtacgcctcggagtgttcgagatagccaccgtaaagtcagggacagccatgatggcctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1120 ggtacgcctcggagtgttcgagatagccaccgtaaagtcagggacagccatgatggcctc 1179
Query: 841 atcatccaaagaaatatggccctatttttctctggtggggataggaaggagctgaaactc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1180 atcatccaaagaaatatggccctatttttctctggtggggataggaaggagctgaaactc 1239
Query: 901 agagttacaggtagaatatggaaggaacaacagaatccagatgctggggtgtgcatacca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 agagttacaggtagaatatggaaggaacaacagaatccagatgctggggtgtgcatacca 1299
Query: 961 aatctctgtagctaa 975
|||||||||||||||
Sbjct: 1300 aatctctgtagctaa 1314
>gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n=1; Medicago
truncatula|Rep: SINA2 - Medicago truncatula (Barrel
medic), partial (89%)
Length = 1460
Score = 264 bits (133), Expect = 9e-70
Identities = 469/581 (80%)
Strand = Plus / Plus
Query: 181 gaatgccctgtatgtaccaattcaatgtacccaccaattcatcagtgccacaatggccac 240
|||||||| || || || ||||| |||||||| ||||| |||||||| |||||||| |||
Sbjct: 489 gaatgccccgtttgcacaaattcgatgtaccctccaatccatcagtgtcacaatggacac 548
Query: 241 acattgtgttcgacgtgtaaaacaagggtgcacaaccgatgtcccacttgtagacaagag 300
|| | ||||| || ||||| |||||||||||||||||||| || ||||| || || |||
Sbjct: 549 accctttgttcaacatgtaagacaagggtgcacaaccgatgcccaacttgcaggcaggag 608
Query: 301 cttggggatattaggtgtctagcactggagaaggtggctgaatcacttgagttaccttgc 360
|| || ||||| |||||||| |||||||||||| | || || ||||| || | ||||||
Sbjct: 609 ctcggtgatatcaggtgtctggcactggagaagatagcagagtcactggaactgccttgc 668
Query: 361 aagtactactcccttggatgtccagaaatctttccatactacagcaagcttaagcatgag 420
| ||| ||||||||| |||||||| || ||||| |||||||||||||| || || |||
Sbjct: 669 agatacatctcccttgggtgtccagagatatttccctactacagcaagctcaaacacgag 728
Query: 421 acaatatgcaatttcagaccatatagttgtccttatgcgggatccgagtgttctgttgtc 480
| | || || |||||||| || | || |||||||| ||||| || || ||||||||
Sbjct: 729 gctgtttgtaacttcagaccgtacaactgcccttatgccggatcagactgctctgttgtt 788
Query: 481 ggggatattcccttcctcgttgctcacttgagggatgaccataaggtggacatgcacacg 540
|| |||||||| | ||| |||| ||| || ||||||||||| | ||| || ||||| |
Sbjct: 789 ggtgatattccataccttgttggtcatttaagggatgaccacagggttgatatgcattct 848
Query: 541 ggatgcacgttcaaccatcgttatgtgaagtcaaatccccgtgaagtagagaatgcaacc 600
|||||||| || |||||||||||||| ||||| |||||| |||||||| ||||| ||
Sbjct: 849 ggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaaatgctaca 908
Query: 601 tggatgctcacagtatttcattgttttggccaatatttctgcctgcattttgaagctttc 660
|||||||| || || || ||||| ||||| || ||||| ||||| ||||||||||| |||
Sbjct: 909 tggatgctaacggttttccattgctttggtcagtatttttgcctccattttgaagccttc 968
Query: 661 cagcttggcatggcccccgtttacatggcattccttcgtttcatgggcgatgagaatgag 720
||||| || | || || |||||||||||||||||||| |||||||| || || | |||
Sbjct: 969 cagctcggtacagctcctgtttacatggcattccttcggttcatgggagacgaaagagag 1028
Query: 721 gctcggaattatagctatagcctagaggttggggccaatgg 761
|| ||||| || ||||||||| | |||||||| | ||||||
Sbjct: 1029 gcccggaactacagctatagcttggaggttggaggcaatgg 1069
>gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 678
Score = 145 bits (73), Expect = 6e-34
Identities = 235/289 (81%)
Strand = Plus / Plus
Query: 473 ctgttgtcggggatattcccttcctcgttgctcacttgagggatgaccataaggtggaca 532
||||||| || |||||||| | ||| |||| ||| || ||||||||||| | ||| || |
Sbjct: 1 ctgttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgata 60
Query: 533 tgcacacgggatgcacgttcaaccatcgttatgtgaagtcaaatccccgtgaagtagaga 592
|||| | |||||||| || |||||||||||||| ||||| |||||| |||||||| |
Sbjct: 61 tgcattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaa 120
Query: 593 atgcaacctggatgctcacagtatttcattgttttggccaatatttctgcctgcattttg 652
|||| || |||||||| || || || ||||| ||||| || ||||| ||||| |||||||
Sbjct: 121 atgctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttg 180
Query: 653 aagctttccagcttggcatggcccccgtttacatggcattccttcgtttcatgggcgatg 712
|||| |||||||| || | || || |||||||||||||||||||| |||||||| || |
Sbjct: 181 aagccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacg 240
Query: 713 agaatgaggctcggaattatagctatagcctagaggttggggccaatgg 761
| | ||||| ||||| || ||||||||| | |||||||| | ||||||
Sbjct: 241 aaagagaggcccggaactacagctatagcttggaggttggaggcaatgg 289
>gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n=1; Medicago
truncatula|Rep: SINA3 - Medicago truncatula (Barrel
medic), partial (38%)
Length = 555
Score = 56.0 bits (28), Expect = 4e-07
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 583 gaagtagagaatgcaacctggatgctcacagtatttcattgttttggccaatatttctgc 642
||||| ||||| || || |||||||| || || ||| ||| || ||||| ||||||||
Sbjct: 2 gaagttgagaacgccacatggatgctaacggtctttagttgcttcggccagtatttctgt 61
Query: 643 ctgcattttgaagctttccagcttggcatggcccccgtttacatggcattccttcgtttc 702
||||||||||||||||| || || || ||||| || || ||||| || || | || |||
Sbjct: 62 ctgcattttgaagcttttcaactaggaatggctcctgtctacatcgcgtttttgcggttc 121
Query: 703 atgggcgatgagaatgaggc 722
||||| ||||| ||||||||
Sbjct: 122 atgggggatgataatgaggc 141