Miyakogusa Predicted Gene
- Lj1g3v0984180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0984180.1 tr|G7J6V7|G7J6V7_MEDTR Pectinesterase OS=Medicago
truncatula GN=MTR_3g091380 PE=3 SV=1,73.4,0,seg,NULL; Pectin
lyase-like,Pectin lyase fold/virulence factor; Plant invertase/pectin
methylesteras,CUFF.26602.1
(1482 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 1538 0.0
gnl|LJGI|TC70814 similar to UniRef100_Q708X3 Cluster: Pectin met... 127 2e-28
gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectineste... 88 2e-16
gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome... 66 7e-10
gnl|LJGI|TC78711 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 64 3e-09
gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosom... 58 2e-07
>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (40%)
Length = 825
Score = 1538 bits (776), Expect = 0.0
Identities = 814/826 (98%), Gaps = 2/826 (0%)
Strand = Plus / Plus
Query: 540 gctcaccaaccaggacacgtgcgcggatgggtttgccgacacctccggcgacgtcaagga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gctcaccaaccaggacacgtgcgcggatgggtttgccgacacctccggcgacgtcaagga 61
Query: 600 ccagatggctggcaacctcaaggatctttcagagctcgtcagcaactgcctcgccatatt 659
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccagatggctgtcaacctcaaggatctttcagagctcgtcagcaactgcctcgccatatt 121
Query: 660 cgctggcgccggcgatgacttctccggcgttcccatacagaatcgacggttactcgcaat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgctggcgccggcgatgacttctccggcgttcccatacagaatcgacggttactcgcaat 181
Query: 720 gcgagatgataatttcccgagatggttgaaccggcgagataggagattgctgagccttcc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcgagatgataatttcccgagatggttgaaccggcgagataggagattgctgagccttcc 241
Query: 780 ggtgtcggcaatgcaagccgatgttgtcgtctcgaaagatggcaacggaacggcgaagac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgtcggcaatgcaagccgatgttgtcgtctcgaaagatggcaacggaacggcgaagac 301
Query: 840 catcgccgaagctattaagaaggtgccggagtatggctcccggcgtttcattatctacgt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catcgccgaagctattaagaaggtgccggagtatggctcccggcgtttcattatctacgt 361
Query: 900 cagggcaggaaggtatgaagagaacaatttgaagatagggagaaagagaaccaatgtgat 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagggcaggaaggtatgaagagaacaatttgaagatagggagaaagagaaccaatgtgat 421
Query: 960 gatcataggggatggaaagggcaagacagtcattacaggtggcaaaaatgtcatggatgg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatcataggggatggaaagggcaagacagtcattacaggtggcaaaaatgtcatggatgg 481
Query: 1020 cctcctcaccacatttcacactgcttcctttgctgcttcaggcgcaggtttcattgcaag 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctcctcaccacatttcacactgcttcctttgctgcttcaggcgcaggtttcattgcaag 541
Query: 1080 ggacatgacttttgagaactacgccgggccggagaagcaccaagcggtggccctccgtgt 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggacatgacttttgagaactacgccgggccggagaagcaccaagcggtggccctccgtgt 601
Query: 1140 cggagcagaccacgcggtggtgtaccgctgcaatgtgattgggtaccaggacacaatgta 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggagcagaccacgcggtggtgtaccgctgcaatgtgattgggtaccaggacacaatgta 661
Query: 1200 tgtacactccaaccgtcaattctaccgcgagtgtgacatctacggcaccgtagacttcat 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgtacactccaaccgtcaattctaccgcgagtgtgacatctacggcaccgtagacttcat 721
Query: 1260 attcggcaatgccgcggtagttttccaaaactgcagcctctacgcgcgaaagcccatggc 1319
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 attcagcaatgccgcggtagttttccaaaactgcagcctctacgcgcgaaagcccatggg 781
Query: 1320 ccaacnnnnnnncaccatcacggcccaaaatagaaaggacccgaat 1365
||||| ||||||| |||||| |||||||||||||||||||
Sbjct: 782 ccaac-aaaaaacaccatctcggccc-aaatagaaaggacccgaat 825
>gnl|LJGI|TC70814 similar to UniRef100_Q708X3 Cluster: Pectin methylesterase; n=1;
Cicer arietinum|Rep: Pectin methylesterase - Cicer
arietinum (Chickpea) (Garbanzo), partial (43%)
Length = 564
Score = 127 bits (64), Expect = 2e-28
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1415 atctcaaagcttccaatgaaagctttgagacctatctgggccgaccgtggaaactttact 1474
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctcaaagcttccaatgacagctttgagacctatctgggccgaccgtggaaactttact 60
Query: 1475 ctagaacg 1482
||||||||
Sbjct: 61 ctagaacg 68
>gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectinesterase-3 precursor; n=1;
Phaseolus vulgaris|Rep: Pectinesterase-3 precursor -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(34%)
Length = 773
Score = 87.7 bits (44), Expect = 2e-16
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1207 tccaaccgtcaattctaccgcgagtgtgacatctacggcaccgtagacttcatattcggc 1266
|||||||| |||||||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 99 tccaaccgccaattctaccgcgaatgtgacatcactggcaccatagacttcatattcggc 158
Query: 1267 aatgccgcggtagttttccaaaactgca 1294
||||| || | |||||||||||||||
Sbjct: 159 aatgcagcttcaattttccaaaactgca 186
>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 1064
Score = 65.9 bits (33), Expect = 7e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1183 taccaggacacaatgtatgtacactccaaccgtcaattctaccgcgagtgtgacatctac 1242
||||||||||| | || || ||||||||||| |||||||||||||| || |||| |||
Sbjct: 264 taccaggacactctctacgtgcactccaaccgccaattctaccgcgactgccacatatac 323
Query: 1243 ggcaccgtagacttcat 1259
|||||| ||||||||||
Sbjct: 324 ggcaccatagacttcat 340
>gnl|LJGI|TC78711 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (22%)
Length = 787
Score = 63.9 bits (32), Expect = 3e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 410 cccgcgtccgcgccgcctacgacgactgccttgagcttctcgatgattccgttgacgctc 469
|||||| ||||||||||||||| || ||||||||||| ||||| || ||| | |||||||
Sbjct: 510 cccgcgcccgcgccgcctacgaagattgccttgagctcctcgacgactccatggacgctc 569
Query: 470 ttggccgctcactctcctcc 489
| |||||| |||||||||
Sbjct: 570 tctcccgctctctctcctcc 589
>gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 684
Score = 58.0 bits (29), Expect = 2e-07
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 1216 caattctaccgcgagtgtgacatctacggcaccgtagacttcatattcggcaatgccgcg 1275
||||| ||||| || ||||||||||| ||||| || || |||||||| || ||||||||
Sbjct: 638 caattttaccgtgaatgtgacatctatggcacagttgatttcatatttggaaatgccgct 579
Query: 1276 gtagttttccaaa 1288
|| ||||||||||
Sbjct: 578 gttgttttccaaa 566