Miyakogusa Predicted Gene
- Lj1g3v0968900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0968900.1 tr|G7J6T9|G7J6T9_MEDTR Phosphomevalonate kinase
OS=Medicago truncatula GN=MTR_3g091190 PE=3 SV=1,88.71,0,Ribosomal
protein S5 domain 2-like,Ribosomal protein S5 domain 2-type fold; no
description,Ribosomal,CUFF.26685.1
(1524 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73510 similar to UniRef100_Q944G1 Cluster: Phosphomev... 952 0.0
gnl|LJGI|TC65630 similar to UniRef100_A7PBZ4 Cluster: Chromosome... 831 0.0
gnl|LJGI|BP066281 similar to UniRef100_A7PBZ4 Cluster: Chromosom... 500 e-140
>gnl|LJGI|TC73510 similar to UniRef100_Q944G1 Cluster: Phosphomevalonate kinase; n=1;
Hevea brasiliensis|Rep: Phosphomevalonate kinase - Hevea
brasiliensis (Para rubber tree), partial (33%)
Length = 621
Score = 952 bits (480), Expect = 0.0
Identities = 517/533 (96%), Gaps = 16/533 (3%)
Strand = Plus / Plus
Query: 1 atggccgtagttgcttctgctcctgggaaggtgttgatgacagggggttacctcattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atggccgtagttgcttctgctcctgggaaggtgttgatgacagggggttacctcattctg 148
Query: 61 gagcgacccaatgcaggccttgtcctcagtacaagtgctcgcttctacgccatcatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gagcgacccaatgcaggccttgtcctcagtacaagtgctcgcttctacgccatcatcaaa 208
Query: 121 cccttccatcctcaaatcaaacctgatgcatgggcatggggttggacagatgtcaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cccttccatcctcaaatcaaacctgatgcatgggcatggggttggacagatgtcaaatta 268
Query: 181 acctcccctcagctctccagagaagccttgtacaaactagctctcaataatctcaccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 acctcccctcagctctccagagaagccttgtacaaactagctctcaataatctcaccatc 328
Query: 241 caaaatgtttcctcatgtgaatcaaggaatccttttgtggaatatgcagtgcagtattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 caaaatgtttcctcatgtgaatcaaggaatccttttgtggaatatgcagtgcagtattct 388
Query: 301 gtggctgcagcatatgcgacgtttgaccagagtaaaaaggacttgttacacaaactactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtggctgcagcatatgcgacgtttgaccagagtaaaaaggacttgttacacaaactactt 448
Query: 361 ttacaaggtcttgacattacaatcttgggttccaatgatttttattcatacaggaatg-- 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttacaaggtcttgacattacaatcttgggttccaatgatttttattcatacaggaatgag 508
Query: 419 --------------agattgagaaacgtggactccctttgacaccagaatcattggccac 464
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttaaatacttctgcagattgagaaacgtggactccctttgacaccagaatcattggccac 568
Query: 465 tcttccaccctttgctttcatttccttcaacactgatgatgctattgaaggaa 517
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tcttccaccctttgctttcatttccttcaacactgatgatgctattgaaggaa 621
>gnl|LJGI|TC65630 similar to UniRef100_A7PBZ4 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 654
Score = 831 bits (419), Expect = 0.0
Identities = 428/431 (99%)
Strand = Plus / Plus
Query: 1094 aatctgtgattgacagctgcagcatactcagatcagataagtggatagaacaagcttctg 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatctgtgattgacagctgcagcatactcagatcagataagtggatagaacaagcttctg 61
Query: 1154 aacctgtaaaggaagcagttattaaagcactgctgggtgcaagagatgccatgctgggaa 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aacctgtaaaggaagcagttattaaagcactgctgggtgcaagagatgccatgctgggaa 121
Query: 1214 ttagatatcatatgcgcctgatgggcgaggcttcaggggttccaattgaacctgaaacac 1273
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122 ttagatatcatatgcgcctgatgggcgaggcttcaggggctccaattgaacctgaaacac 181
Query: 1274 aaacacaacttctggatgctacaatgaacttggaaggagtattattggctggagttccag 1333
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 182 aaacacaacttctggatgctacaatgaacctggaaggagtattattggctggagttccag 241
Query: 1334 gggcaggaggatatgatgcagtctttgctgttactttgggagattcgagcagcaatgtga 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gggcaggaggatatgatgcagtctttgctgttactttgggagattcgagcagcaatgtga 301
Query: 1394 ctaaagtatggggctcactgaatgttcttgccatgttggttaaagaagacccttgtggtg 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctaaagtatggggctcactgaatgttcttgccatgttggttaaagaagacccttgtggtg 361
Query: 1454 tttctttagaaagtgctgatccaagaaccaatgaaatcacatcagcagtgtcttcaattc 1513
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttctttggaaagtgctgatccaagaaccaatgaaatcacatcagcagtgtcttcaattc 421
Query: 1514 atattgaatag 1524
|||||||||||
Sbjct: 422 atattgaatag 432
>gnl|LJGI|BP066281 similar to UniRef100_A7PBZ4 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 470
Score = 500 bits (252), Expect = e-140
Identities = 263/267 (98%)
Strand = Plus / Minus
Query: 1258 attgaacctgaaacacaaacacaacttctggatgctacaatgaacttggaaggagtatta 1317
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 327 attgaacctgaaacaccaacacaacttctggatgctaccatgaacttggaaggagtatta 268
Query: 1318 ttggctggagttccaggggcaggaggatatgatgcagtctttgctgttactttgggagat 1377
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 267 ttggctggagttccaggggcaggaggatatgatncagtctttgctgttactttgggagat 208
Query: 1378 tcgagcagcaatgtgactaaagtatggggctcactgaatgttcttgccatgttggttaaa 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcgagcagcaatgtgactaaagtatggggctcactgaatgttcttgccatgttggttaaa 148
Query: 1438 gaagacccttgtggtgtttctttagaaagtgctgatccaagaaccaatgaaatcacatca 1497
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 147 gaagacccttgtggtgtttctttagaaagtgctgacccaagaaccaatgaaatcacatca 88
Query: 1498 gcagtgtcttcaattcatattgaatag 1524
|||||||||||||||||||||||||||
Sbjct: 87 gcagtgtcttcaattcatattgaatag 61