Miyakogusa Predicted Gene
- Lj1g3v0948600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0948600.1 Non Chatacterized Hit- tr|I1JJU8|I1JJU8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.22,0,SUBFAMILY NOT
NAMED,NULL; CHLOROPHYLL A/B BINDING PROTEIN,Chlorophyll A-B binding
protein, plant; Ch,CUFF.26597.1
(831 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68430 homologue to UniRef100_Q32904 Cluster: Chloroph... 1647 0.0
gnl|LJGI|AV775909 homologue to UniRef100_Q9M538 Cluster: Chlorop... 416 e-116
gnl|LJGI|TC81838 similar to UniRef100_Q9M600 Cluster: Chlorophyl... 379 e-104
gnl|LJGI|AV776525 similar to UniRef100_Q9M538 Cluster: Chlorophy... 281 3e-75
gnl|LJGI|AV771091 similar to UniRef100_P27522 Cluster: Chlorophy... 244 7e-64
gnl|LJGI|AV770329 similar to UniRef100_Q32904 Cluster: Chlorophy... 76 4e-13
gnl|LJGI|TC76441 homologue to UniRef100_Q9XQB1 Cluster: LHCII ty... 52 6e-06
>gnl|LJGI|TC68430 homologue to UniRef100_Q32904 Cluster: Chlorophyll a-b binding
protein 3, chloroplast precursor; n=1; Pisum
sativum|Rep: Chlorophyll a-b binding protein 3,
chloroplast precursor - Pisum sativum (Garden pea),
partial (94%)
Length = 1189
Score = 1647 bits (831), Expect = 0.0
Identities = 831/831 (100%)
Strand = Plus / Plus
Query: 1 atggctgcacaagctcttgtttcttcatcatctcttgcattctcagctgaggctgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atggctgcacaagctcttgtttcttcatcatctcttgcattctcagctgaggctgccaaa 197
Query: 61 cagagccttggagcaagatcactccaatctcctattggatcctccagaaaaggctccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cagagccttggagcaagatcactccaatctcctattggatcctccagaaaaggctccttc 257
Query: 121 attgtcaaggcagcttctactcctcctgtcaagcaaggagcaaatagacccttgtggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attgtcaaggcagcttctactcctcctgtcaagcaaggagcaaatagacccttgtggttt 317
Query: 181 gcatcaaagcagagtctttcttacttggatggcagccttccaggtgactttggatttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcatcaaagcagagtctttcttacttggatggcagccttccaggtgactttggatttgac 377
Query: 241 ccactaggactctcagaccctgaaggaacaggagggttcatcgagccaaaatggctagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccactaggactctcagaccctgaaggaacaggagggttcatcgagccaaaatggctagca 437
Query: 301 tacggtgagataatcaacggtcgcttcgcaatgttgggtgcagccggtgccatcgcgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tacggtgagataatcaacggtcgcttcgcaatgttgggtgcagccggtgccatcgcgcct 497
Query: 361 gaaattctcggcaaggccggtctgattccagaggaaacagcactcccatggttccaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaaattctcggcaaggccggtctgattccagaggaaacagcactcccatggttccaaacc 557
Query: 421 ggtgtgattccacctgcaggaacatacagctactgggcagactcatacacgctgtttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggtgtgattccacctgcaggaacatacagctactgggcagactcatacacgctgtttgtg 617
Query: 481 ttggagatggcgctcatgggctttgcggagcacaggaggttccaagactgggccaagccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttggagatggcgctcatgggctttgcggagcacaggaggttccaagactgggccaagccc 677
Query: 541 gggtccatgggcaagcagtacttcttgggcctggagaaaggcctcggaggctccggtgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gggtccatgggcaagcagtacttcttgggcctggagaaaggcctcggaggctccggtgac 737
Query: 601 ccggcgtaccctggcgggcctttcttcaaccctcttgggttcggtaaggatgagaaatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ccggcgtaccctggcgggcctttcttcaaccctcttgggttcggtaaggatgagaaatcc 797
Query: 661 atgaaggagttgaagctcaaggaagttaagaatggaaggttggccatgttagcaatcttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atgaaggagttgaagctcaaggaagttaagaatggaaggttggccatgttagcaatcttg 857
Query: 721 ggttactttattcaaggccttgtcactggtgttgggccttaccaaaacctcctagatcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggttactttattcaaggccttgtcactggtgttgggccttaccaaaacctcctagatcat 917
Query: 781 cttgctgaccctgtcaacaacaatgtcttgaccagtctcaagttccactga 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 cttgctgaccctgtcaacaacaatgtcttgaccagtctcaagttccactga 968
>gnl|LJGI|AV775909 homologue to UniRef100_Q9M538 Cluster: Chlorophyll a/b-binding
protein type III; n=1; Alonsoa meridionalis|Rep:
Chlorophyll a/b-binding protein type III - Alonsoa
meridionalis (Mask flower) (Alonsoa caulialata), partial
(39%)
Length = 531
Score = 416 bits (210), Expect = e-116
Identities = 225/229 (98%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 512 acaggaggttccaagactgggccaagcccgggtccatgggcaagcagtacttcttgggcc 571
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 531 acaggaggttccaagactgggccaagcccgggtccatggncaagcactacttcttgggcc 472
Query: 572 tggagaaaggcctcggaggctccggtgacccggcgtaccctggcgggcctttcttcaacc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tggagaaaggcctcggaggctccggtgacccggcgtaccctggcgggcctttcttcaacc 412
Query: 632 ctcttgggttcggtaaggatgagaaatccatgaaggagttgaagctcaaggaagttaaga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctcttgggttcggtaaggatgagaaatccatgaaggagttgaagctcaaggaagttaaga 352
Query: 692 atggaaggttggccatgtta-gcaatcttgggttactttattcaaggcc 739
|||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 351 atggaaggttggccatgttacgcgatcttgggttactttattcaaggcc 303
>gnl|LJGI|TC81838 similar to UniRef100_Q9M600 Cluster: Chlorophyll a/b binding
protein precursor; n=1; Euphorbia esula|Rep: Chlorophyll
a/b binding protein precursor - Euphorbia esula (Leafy
spurge), partial (20%)
Length = 578
Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 atggctgcacaagctcttgtttcttcatcatctcttgcattctcagctgaggctgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggctgcacaagctcttgtttcttcatcatctcttgcattctcagctgaggctgccaaa 300
Query: 61 cagagccttggagcaagatcactccaatctcctattggatcctccagaaaaggctccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagagccttggagcaagatcactccaatctcctattggatcctccagaaaaggctccttc 360
Query: 121 attgtcaaggcagcttctactcctcctgtcaagcaaggagcaaatagacccttgtggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgtcaaggcagcttctactcctcctgtcaagcaaggagcaaatagacccttgtggttt 420
Query: 181 gcatcaaagca 191
|||||||||||
Sbjct: 421 gcatcaaagca 431
>gnl|LJGI|AV776525 similar to UniRef100_Q9M538 Cluster: Chlorophyll a/b-binding
protein type III; n=1; Alonsoa meridionalis|Rep:
Chlorophyll a/b-binding protein type III - Alonsoa
meridionalis (Mask flower) (Alonsoa caulialata), partial
(36%)
Length = 437
Score = 281 bits (142), Expect = 3e-75
Identities = 201/218 (92%), Gaps = 2/218 (0%)
Strand = Plus / Minus
Query: 580 ggcctcggaggctccggtgacccggcgtaccctggcgggcctttcttcaaccctcttggg 639
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 437 ggcctcggaggctccggtgacccggcgtaccctggcggccctttcttcaaccctcttggg 378
Query: 640 ttcggtaaggatgagaaatccatgaaggag-ttgaagctcaaggaagttaagaatggaag 698
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 377 ttcggtaaggatgaggaatccatgaaggagtttgaagctcaaggaagttaagaatggaag 318
Query: 699 gttggccatgttagcaatcttgggttactttattcaaggccttgtcactggtgttgggcc 758
||||||||||||| | ||||||||| || |||||||||||| |||||||| ||||||||
Sbjct: 317 gttggccatgttacccatcttgggtgacgttattcaaggccgtgtcactgtcgttgggcc 258
Query: 759 ttaccaaaacct-cctagatcatcttgctgaccctgtc 795
| ||| |||| ||| |||||||||||||| ||||||
Sbjct: 257 tgaccctgacctgccttgatcatcttgctgatcctgtc 220
>gnl|LJGI|AV771091 similar to UniRef100_P27522 Cluster: Chlorophyll a-b binding
protein 8, chloroplast precursor; n=3; Solanum|Rep:
Chlorophyll a-b binding protein 8, chloroplast precursor
- Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (23%)
Length = 341
Score = 244 bits (123), Expect = 7e-64
Identities = 242/270 (89%), Gaps = 10/270 (3%)
Strand = Plus / Minus
Query: 572 tggagaaaggcctcggaggctccggtgacccggcgtaccctggcgggcctttcttca-ac 630
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 341 tggagaaaggcctcggaggctccggtgacccggcgtaccctgcagggcccttcttcatac 282
Query: 631 cctcttgggttcggta-aggatgagaaatcca-tgaa--ggagttgaagctcaaggaagt 686
|||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||
Sbjct: 281 cctcttgggttcggtataggatgaggaatccactgaacgcgagttgaagctcaaggaaag 222
Query: 687 taagaatggaaggttggcca-tgtta-gcaatcttgggttactttattcaaggccttgt- 743
|||||||||||||||||||| || || || |||||||||||||||||||||||||||||
Sbjct: 221 taagaatggaaggttggccactgctacgccatcttgggttactttattcaaggccttgtg 162
Query: 744 ca-ctggtgttgggccttaccaaaacct-cctagatcatcttgctgaccctgtcaacaac 801
|| |||||||||||||||||| || ||| |||||||||||||||||| |||||| || ||
Sbjct: 161 cacctggtgttgggccttacccaaccctccctagatcatcttgctgaacctgtccaccac 102
Query: 802 aatgtcttgaccagtctcaagttccactga 831
||||||||||| ||||| |||||| ||||
Sbjct: 101 catgtcttgacccgtctccagttcccctga 72
>gnl|LJGI|AV770329 similar to UniRef100_Q32904 Cluster: Chlorophyll a-b binding
protein 3, chloroplast precursor; n=1; Pisum
sativum|Rep: Chlorophyll a-b binding protein 3,
chloroplast precursor - Pisum sativum (Garden pea),
partial (12%)
Length = 275
Score = 75.8 bits (38), Expect = 4e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 767 acctcctagatcatcttgctgaccctgtcaacaacaatgtcttgaccagtctcaagtt 824
||||| |||||||| ||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 147 acctcatagatcatattgctgatcctgtcgaccacaatgtcttgaccagtctcaagtt 90
>gnl|LJGI|TC76441 homologue to UniRef100_Q9XQB1 Cluster: LHCII type III chlorophyll
a/b binding protein; n=1; Vigna radiata var.
radiata|Rep: LHCII type III chlorophyll a/b binding
protein - Phaseolus aureus (Mung bean) (Vigna radiata),
complete
Length = 1198
Score = 52.0 bits (26), Expect = 6e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 688 aagaatggaaggttggccatgttagcaatcttgggttactttattcaaggccttgtcact 747
||||||||||||||||||||||| | || || |||| |||| |||||| | ||||||||
Sbjct: 822 aagaatggaaggttggccatgttctccatgtttggtttctttgttcaagccattgtcact 881
Query: 748 gg 749
||
Sbjct: 882 gg 883