Miyakogusa Predicted Gene
- Lj1g3v0948570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0948570.1 tr|Q6A167|Q6A167_PEA Ftsh-like protease OS=Pisum
sativum GN=ftsh11 PE=2 SV=1,81.8,0,AAA,ATPase, AAA-type, conserved
site; no description,NULL; P-loop containing nucleoside
triphosphate,CUFF.26560.1
(2397 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59016 similar to UniRef100_Q6A167 Cluster: Ftsh-like ... 1187 0.0
gnl|LJGI|TC59947 similar to UniRef100_Q6A167 Cluster: Ftsh-like ... 916 0.0
gnl|LJGI|DC598812 similar to UniRef100_Q6A167 Cluster: Ftsh-like... 904 0.0
gnl|LJGI|AV421390 UniRef100_Q6A167 Cluster: Ftsh-like protease; ... 783 0.0
gnl|LJGI|GO022530 similar to UniRef100_A7QTW2 Cluster: Chromosom... 180 3e-44
gnl|LJGI|GO027410 similar to UniRef100_Q6A167 Cluster: Ftsh-like... 176 4e-43
>gnl|LJGI|TC59016 similar to UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum
sativum|Rep: Ftsh-like protease - Pisum sativum (Garden
pea), partial (12%)
Length = 770
Score = 1187 bits (599), Expect = 0.0
Identities = 599/599 (100%)
Strand = Plus / Plus
Query: 1 atggccacacttcaagcttctcttctcttcaaaccacccctccctttcctctctcccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggccacacttcaagcttctcttctcttcaaaccacccctccctttcctctctcccaac 231
Query: 61 cacgccgccgcgttctccctccaccaccacctctccttccaccccacgcgcctccgcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cacgccgccgcgttctccctccaccaccacctctccttccaccccacgcgcctccgcccc 291
Query: 121 cgcgtccactgcaccttccgccccgactccgccgccagttcccgccccgaaccacccgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cgcgtccactgcaccttccgccccgactccgccgccagttcccgccccgaaccacccgag 351
Query: 181 gaaccttcagtcgacgcggccgcggaagcggttgttaattcgagcagtgacggtgatgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaaccttcagtcgacgcggccgcggaagcggttgttaattcgagcagtgacggtgatgcg 411
Query: 241 acagtcgcggtttcggattcggattcgaacgaatcgaggctcgaggtgattggtgatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 acagtcgcggtttcggattcggattcgaacgaatcgaggctcgaggtgattggtgatttg 471
Query: 301 gagggggaagagaagattgggaatgatttgaatgagaagaaggaggtggaggttgaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gagggggaagagaagattgggaatgatttgaatgagaagaaggaggtggaggttgaggct 531
Query: 361 gttgttgctggtgatacgcggttgccgctattggtgtttttggtgggagtgtgggcgagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gttgttgctggtgatacgcggttgccgctattggtgtttttggtgggagtgtgggcgagg 591
Query: 421 gcgagagaaggtgtggagagggtggtttcggaattctatggctggtggccgttttggcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gcgagagaaggtgtggagagggtggtttcggaattctatggctggtggccgttttggcgc 651
Query: 481 cgggagaagcggttggcacggttgatttccgatgccgacgcgaaccctcaggatgctgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cgggagaagcggttggcacggttgatttccgatgccgacgcgaaccctcaggatgctgcc 711
Query: 541 aagcagagtgctttgtttgttgagctaaacaagcacagtcctgagtctgtcattaagcg 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aagcagagtgctttgtttgttgagctaaacaagcacagtcctgagtctgtcattaagcg 770
>gnl|LJGI|TC59947 similar to UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum
sativum|Rep: Ftsh-like protease - Pisum sativum (Garden
pea), partial (19%)
Length = 800
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1936 tcaagtgatgagacttcaataagcaagaagcagttgttagctcgccttgatgtttgtatg 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaagtgatgagacttcaataagcaagaagcagttgttagctcgccttgatgtttgtatg 60
Query: 1996 ggaggaagagttgcagaagagcttatctttggtcaggattatgtcacaactggagcaagt 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaggaagagttgcagaagagcttatctttggtcaggattatgtcacaactggagcaagt 120
Query: 2056 agtgatcttcatactgctactgagcttgcccattacatggtatcaaattgtgggatgagt 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgatcttcatactgctactgagcttgcccattacatggtatcaaattgtgggatgagt 180
Query: 2116 gatgcaatcgggccagttcatataaaggagagaccaagttctgatatgcagtcacgtatt 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgcaatcgggccagttcatataaaggagagaccaagttctgatatgcagtcacgtatt 240
Query: 2176 gatgcagaggttgttaaactccttagagaagcatatgatcgagtgaaagcccttctgaag 2235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgcagaggttgttaaactccttagagaagcatatgatcgagtgaaagcccttctgaag 300
Query: 2236 aagcatgagaaggcattacatgcgctggcaaatgcattattagagtatgagacacttagt 2295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcatgagaaggcattacatgcgctggcaaatgcattattagagtatgagacacttagt 360
Query: 2296 gcagaagaaatcaagcgattacttctcccacatcgggaaggaagacttccagaacaacag 2355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcagaagaaatcaagcgattacttctcccacatcgggaaggaagacttccagaacaacag 420
Query: 2356 gaacaagaagaagcagaaggggagcttgtactggcgtaatct 2397
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacaagaagaagcagaaggggagcttgtactggcgtaatct 462
>gnl|LJGI|DC598812 similar to UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum
sativum|Rep: Ftsh-like protease - Pisum sativum (Garden
pea), partial (8%)
Length = 533
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Minus
Query: 123 cgtccactgcaccttccgccccgactccgccgccagttcccgccccgaaccacccgagga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cgtccactgcaccttccgccccgactccgccgccagttcccgccccgaaccacccgagga 474
Query: 183 accttcagtcgacgcggccgcggaagcggttgttaattcgagcagtgacggtgatgcgac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 accttcagtcgacgcggccgcggaagcggttgttaattcgagcagtgacggtgatgcgac 414
Query: 243 agtcgcggtttcggattcggattcgaacgaatcgaggctcgaggtgattggtgatttgga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtcgcggtttcggattcggattcgaacgaatcgaggctcgaggtgattggtgatttgga 354
Query: 303 gggggaagagaagattgggaatgatttgaatgagaagaaggaggtggaggttgaggctgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gggggaagagaagattgggaatgatttgaatgagaagaaggaggtggaggttgaggctgt 294
Query: 363 tgttgctggtgatacgcggttgccgctattggtgtttttggtgggagtgtgggcgagggc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgttgctggtgatacgcggttgccgctattggtgtttttggtgggagtgtgggcgagggc 234
Query: 423 gagagaaggtgtggagagggtggtttcggaattctatggctggtggccgttttggcgccg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gagagaaggtgtggagagggtggtttcggaattctatggctggtggccgttttggcgccg 174
Query: 483 ggagaagcggttggcacggttgatttccgatgccgacgcgaaccctcaggatgctgccaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggagaagcggttggcacggttgatttccgatgccgacgcgaaccctcaggatgctgccaa 114
Query: 543 gcagagtgctttgtttgttgagctaaacaagcacag 578
||||||||||||||||||||||||||||||||||||
Sbjct: 113 gcagagtgctttgtttgttgagctaaacaagcacag 78
>gnl|LJGI|AV421390 UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum sativum|Rep:
Ftsh-like protease - Pisum sativum (Garden pea), partial
(17%)
Length = 395
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 995 attccccaaaggagctaaataaggaagtaatgccagaaaagaatgtaaaaacttttaagg 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attccccaaaggagctaaataaggaagtaatgccagaaaagaatgtaaaaacttttaagg 60
Query: 1055 acgtgaaaggttgtgatgatgcaaagcaagaacttgaggaagttgtagagtacttaagga 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgtgaaaggttgtgatgatgcaaagcaagaacttgaggaagttgtagagtacttaagga 120
Query: 1115 atccagctaaatttacgcgccttggaggaaagttgccaaagggtattcttttgacaggag 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atccagctaaatttacgcgccttggaggaaagttgccaaagggtattcttttgacaggag 180
Query: 1175 cgcctggaaccggaaaaacactgctcgccaaggctattgctggagaagctggcgttccat 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgcctggaaccggaaaaacactgctcgccaaggctattgctggagaagctggcgttccat 240
Query: 1235 tcttctatcgggcagggtctgaatttgaggaaatgtttgttggagttggagctcgacgtg 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttctatcgggcagggtctgaatttgaggaaatgtttgttggagttggagctcgacgtg 300
Query: 1295 taagatccttatttcaagcagccaaaaagaaggctccttgcatcatattcattgatgaaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagatccttatttcaagcagccaaaaagaaggctccttgcatcatattcattgatgaaa 360
Query: 1355 ttgatgctgttggatcaacaaggaaacaatgggag 1389
|||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgatgctgttggatcaacaaggaaacaatgggag 395
>gnl|LJGI|GO022530 similar to UniRef100_A7QTW2 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 776
Score = 180 bits (91), Expect = 3e-44
Identities = 193/227 (85%)
Strand = Plus / Plus
Query: 1035 gaatgtaaaaacttttaaggacgtgaaaggttgtgatgatgcaaagcaagaacttgagga 1094
|||||| ||||| |||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 379 gaatgtcaaaacatttaaggatgttaaaggctgtgatgatgcaaagcaagaacttgagga 438
Query: 1095 agttgtagagtacttaaggaatccagctaaatttacgcgccttggaggaaagttgccaaa 1154
| |||| |||||| |||| |||||||| |||||||| || ||||||| |||||| |||||
Sbjct: 439 aattgttgagtacctaagaaatccagcaaaatttactcgtcttggagtaaagttcccaaa 498
Query: 1155 gggtattcttttgacaggagcgcctggaaccggaaaaacactgctcgccaaggctattgc 1214
||| ||||| ||||| || ||||||| |||||||| ||| | ||||| ||| ||||
Sbjct: 499 ggggattctcctgacaagaagatctggaactggaaaaactctgttagccaaagcttttgc 558
Query: 1215 tggagaagctggcgttccattcttctatcgggcagggtctgaatttg 1261
||| |||||||| ||||| || ||||| |||||||| ||||||||||
Sbjct: 559 tggggaagctggtgttccgtttttctaccgggcaggatctgaatttg 605
Score = 113 bits (57), Expect = 5e-24
Identities = 141/169 (83%)
Strand = Plus / Plus
Query: 629 gtagaggggttgcagagtatcttcgggctcttgtagtcactaatgcgattgccgaatatc 688
||||||| |||| ||| ||||||| |||||||| |||||||| ||||| |||||||
Sbjct: 198 gtagaggtgttgtagaatatcttctagctcttgtgacgactaatgctattgctgaatatc 257
Query: 689 ttccagatgaggaatctggaaaaccttctagccttcccatcttgttgcaagagttaaagc 748
||||| |||||||| |||| ||||||| || ||||| | ||||||||||||| ||||
Sbjct: 258 ttccaaatgaggaaactgggaaaccttgtacccttcatactctgttgcaagagttgaagc 317
Query: 749 agcgtgcatcaggtagcacagatgaagcttttcttagccctggaatatc 797
|| |||||||| ||| ||||||||| || |||||||||||||||||||
Sbjct: 318 agtgtgcatcatgtaacacagatgagtctattcttagccctggaatatc 366
Score = 77.8 bits (39), Expect = 3e-13
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 1532 atattgttgtaccaaatccagatgtacgtggtcggcaagaaattttggaactctatctgc 1591
|||||||||||| | |||||||| ||||||| || |||||||| ||||| || ||| |||
Sbjct: 611 atattgttgtacgacatccagatttacgtggccgacaagaaatattggagctttatttgc 670
Query: 1592 aagacaaacctgtagctgatgatgttgatat 1622
|||| |||||| | ||||||||||| |||||
Sbjct: 671 aagataaacctttggctgatgatgtagatat 701
>gnl|LJGI|GO027410 similar to UniRef100_Q6A167 Cluster: Ftsh-like protease; n=1; Pisum
sativum|Rep: Ftsh-like protease - Pisum sativum (Garden
pea), partial (12%)
Length = 893
Score = 176 bits (89), Expect = 4e-43
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 2161 atgcagtcacgtattgatgcagaggttgttaaactccttagagaagcatatgatcgagtg 2220
||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||
Sbjct: 706 atgcagtcacgtattgatgaagaggttgacaaacttcttagagtagcatatgatcgagtg 647
Query: 2221 aaagcccttctgaagaagcatgagaaggcattacatgcgctggcaaatgcattattagag 2280
||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 646 aaagcccttttaaagaagcatgagaaggcattacatgcattggcagatgcattattattt 587
Query: 2281 tatgagacacttagtgcagaagaaatcaagcgattacttct 2321
||||||||||||| |||||| ||||| | |||| |||||||
Sbjct: 586 tatgagacacttaatgcagaggaaattaggcgaatacttct 546
Score = 109 bits (55), Expect = 8e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 1738 ttggagtttgcaaaagacagaatagttatgggtacagagcggaaaacaatgtttgtatca 1797
||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 847 ttggagtttgcaaaagatagaataattatgggtacagagcggaaaacaatgttcatatca 788
Query: 1798 gaagagtcaaaaaag 1812
||||||||||||||
Sbjct: 787 aaagagtcaaaaaag 773