Miyakogusa Predicted Gene

Lj1g3v0948490.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0948490.2 Non Chatacterized Hit- tr|K4CPJ6|K4CPJ6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.44,3e-18,seg,NULL,CUFF.26552.2
         (1182 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71338 weakly similar to UniRef100_A7QTS8 Cluster: Chr...   803   0.0  

>gnl|LJGI|TC71338 weakly similar to UniRef100_A7QTS8 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (53%)
          Length = 743

 Score =  803 bits (405), Expect = 0.0
 Identities = 417/421 (99%)
 Strand = Plus / Plus

                                                                        
Query: 749  cttccagtaacttacaagatgtatccgatggggaaatgaacttcggtaagatattatcaa 808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cttccagtaacttacaagatgtatccgatggggaaatgaacttcggtaagatattatcaa 60

                                                                        
Query: 809  aaattcagaggaggaaaaagaatgcaatgaagtgggaatatcaggctgacatgcttgcag 868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aaattcagaggaggaaaaagaatgcaatgaagtgggaatatcaggctgacatgcttgcag 120

                                                                        
Query: 869  aatttggaaaggattcagaattgtgcatgaaggctgtatgttctctttacaaacagcaaa 928
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aatttagaaaggattcagaattgtgcatgaaggctgtatgttctctttacaaacagcaaa 180

                                                                        
Query: 929  cttccgaggaacagatgagcaaggaatcaatgtgtcacaacaaccgtggattcagcaagt 988
            |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181  cttccgtggaacagatgagcaaggaatcgatgtgtcacaacaaccgtggattcagcaagt 240

                                                                        
Query: 989  gtgatgctcccagaggtagtgatttgggcgagtacctcaccgaaggagatcctagtggtg 1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtgatgctcccagaggtagtgatttgggcgagtacctcaccgaaggagatcctagtggtg 300

                                                                        
Query: 1049 gcttaaagaagtctgtggaggagctgcaagagtatgaccccgaagcagttgaagaatgca 1108
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301  gcttaaagaagtctgtggaggagctgcaagagtatgaccccgaagccgttgaagaatgca 360

                                                                        
Query: 1109 gaacactagctactcgctactcaaagcaactttatgagatttacaagaataatgaagatc 1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gaacactagctactcgctactcaaagcaactttatgagatttacaagaataatgaagatc 420

             
Query: 1169 c 1169
            |
Sbjct: 421  c 421