Miyakogusa Predicted Gene
- Lj1g3v0913120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0913120.1 Non Chatacterized Hit- tr|A2ZR97|A2ZR97_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,68.25,6e-19,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.26520.1
(387 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66207 similar to UniRef100_A7NSI9 Cluster: Chromosome... 662 0.0
gnl|LJGI|TC79351 similar to UniRef100_A7NSJ0 Cluster: Chromosome... 466 e-131
>gnl|LJGI|TC66207 similar to UniRef100_A7NSI9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 644
Score = 662 bits (334), Expect = 0.0
Identities = 352/358 (98%)
Strand = Plus / Plus
Query: 1 atggcatcaccaagtgttgagaaggacaagtaccgcacctatttgcacggagatcaagag 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 17 atggcatcaccaagtgttgaaaaggacaagtaccgcacctatttgcacggagatgaagag 76
Query: 61 aagaacaccaaatggagatttggtgccccacctaactatgaggctgtgaataagttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aagaacaccaaatggagatttggtgccccacctaactatgaggctgtgaataagttattt 136
Query: 121 gaagaaggcagaaccaaggaatggcctcctggatcacttgaagagcaggtgcagacttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gaagaaggcagaaccaaggaatggcctcctggatcacttgaagagcaggtgcagacttta 196
Query: 181 gtaaaaaattgggaaatggaatttttccacaaagttgatataaacgatttcagatcaatt 240
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 197 gttaaaaattgggaaatggaatttttccacaaagttgatataaacgagttcagatcaatt 256
Query: 241 gatcctaagaaatttactttcagcctaaatgggagaaagcctatgagtttggaagagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gatcctaagaaatttactttcagcctaaatgggagaaagcctatgagtttggaagagata 316
Query: 301 ggggaacttggtggaggctacattcccatgttgcaaacattcctacctcaaaaactga 358
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 317 ggggaacttggtgggggctacattcccatgttgcaaacatccctacctcaaaaactga 374
>gnl|LJGI|TC79351 similar to UniRef100_A7NSJ0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 837
Score = 466 bits (235), Expect = e-131
Identities = 254/259 (98%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 100 gaggctgtgaataagttatttgaagaaggcagaaccaaggaatggcctcctggatcactt 159
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggctgtgaataagttatt-gaagaaggcagaaccaaggaatggcctcctggatcactt 59
Query: 160 gaagagcaggtgcagactttagtaaaaaattgggaaatggaatttttccacaaagttgat 219
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaagagcaggtgcagactttagttaaaaattgggaaatggaatttttccacaaagttgat 119
Query: 220 ataaacgatttcagatcaattgatcctaagaaatttactttcagcctaaatgggagaaag 279
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ataaacgagttcagatcaattgatcctaagaaatttactttcagcctaaatgggagaaag 179
Query: 280 cctatgagtttggaagagataggggaacttggtggaggctacattcccatgttgcaaaca 339
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 180 cctatgagtttggaagagataggggaacttggtgggggctacattcccatgttgcaaaca 239
Query: 340 ttcctacctcaaaaactga 358
| |||||||||||||||||
Sbjct: 240 tccctacctcaaaaactga 258