Miyakogusa Predicted Gene

Lj1g3v0913110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0913110.1 tr|Q4A185|Q4A185_MEDTR Beclin 1 protein
OS=Medicago truncatula GN=atg6 PE=2 SV=1,81.63,9e-19,
,gene.Ljchr1_pseudomol_20120830.path1.gene2331.1
         (405 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79871 homologue to UniRef100_Q4A185 Cluster: Beclin 1...   202   1e-51

>gnl|LJGI|TC79871 homologue to UniRef100_Q4A185 Cluster: Beclin 1 protein; n=1;
           Medicago truncatula|Rep: Beclin 1 protein - Medicago
           truncatula (Barrel medic), partial (66%)
          Length = 1039

 Score =  202 bits (102), Expect = 1e-51
 Identities = 129/138 (93%)
 Strand = Plus / Plus

                                                                       
Query: 184 atgaagaagggtcgaagtcggaccctaccagtggatctgaatatgccccgatgggtctgt 243
           |||||||||||||| ||||||||||| || | ||||| |||| | |||||||||||||| 
Sbjct: 32  atgaagaagggtcggagtcggaccctcccggcggatccgaatgtcccccgatgggtctgc 91

                                                                       
Query: 244 cagaactgtcgcaactccctctgcatcgtcggcgtcgattcttacgccgacaagttcttc 303
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  cagaactgccgcaactccctctgcatcgtcggcgtcgattcttacgccgacaagttcttc 151

                             
Query: 304 aacgacccttctcgctcc 321
           ||||||||||||||||||
Sbjct: 152 aacgacccttctcgctcc 169