Miyakogusa Predicted Gene
- Lj1g3v0912010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0912010.1 Non Chatacterized Hit- tr|I1KAG9|I1KAG9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide
repeat; PPR_2,Penta,CUFF.26510.1
(1891 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS352951 weakly similar to UniRef100_A7NSP8 Cluster: Ch... 926 0.0
gnl|LJGI|FS326637 weakly similar to UniRef100_A7NSP8 Cluster: Ch... 545 e-154
gnl|LJGI|FS360680 similar to UniRef100_Q3DAM3 Cluster: Phenylala... 115 1e-24
>gnl|LJGI|FS352951 weakly similar to UniRef100_A7NSP8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 708
Score = 926 bits (467), Expect = 0.0
Identities = 476/479 (99%)
Strand = Plus / Minus
Query: 1413 tttctcaatggagacagaatttggagtaaaaccaggggaagaacattatacatatgttgt 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tttctcaatggagacagaatttggagtaaaaccaggggaagaacattatacatatgttgt 649
Query: 1473 ggagatgttgagtaaagctggtatgctaaaagaagccattgacattgtagaaacaatgcc 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ggagatgttgagtaaagctggtatgctaaaagaagccattgacattgtagaaacaatgcc 589
Query: 1533 atatacaattacccttgacatgtggaggttaattctttctgtttgtgtaattcatggaga 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atatacaattacccttgacatgtggaggttaattctttctgtttgtgtaattcatggaga 529
Query: 1593 cttgcaagttattgaaacagttgcaaaggaaataatggagagggaacctcaggcaccctt 1652
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 528 cttgcaagttattgaaacagttgcagaggaaataatggagagggaacctcaggcaccctt 469
Query: 1653 tccttacttggtgttggctcaggcatatcagatgatgggaagatgggagagcttggttcg 1712
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 468 tccttacttggtgttggctcaggcatatcagatgatggaaagatgggagagcttggttcg 409
Query: 1713 agtgaggaaggatatggaacaaaaatgtactaaagagttcattggatgcagttggtttgg 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agtgaggaaggatatggaacaaaaatgtactaaagagttcattggatgcagttggtttgg 349
Query: 1773 aatgaaaaaccatgtgtacacttttcagtcaaatcagttacagcattatggtggcaagga 1832
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aatgaaaaaccatgggtacacttttcagtcaaatcagttacagcattatggtggcaagga 289
Query: 1833 tctttatctgctgttgaatttactggtatgggagatggagactgaaggttatgtctaaa 1891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tctttatctgctgttgaatttactggtatgggagatggagactgaaggttatgtctaaa 230
>gnl|LJGI|FS326637 weakly similar to UniRef100_A7NSP8 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 487
Score = 545 bits (275), Expect = e-154
Identities = 278/279 (99%)
Strand = Plus / Plus
Query: 1 atgtacacatttttgaagcaaacacaaggtccttacacatcactttcttattgttctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 209 atgtacacatttttgaagcaaacacaaggtccttacacatcactttcttatggttctact 268
Query: 61 ctcctagaccactgtttatctcaaaaatccgttaactttgtcaaaatcgtgcatgcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctcctagaccactgtttatctcaaaaatccgttaactttgtcaaaatcgtgcatgcccat 328
Query: 121 ttcctcaaattgggtctcaacacctacacctatttgggcaatcgctgtctcgatctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcctcaaattgggtctcaacacctacacctatttgggcaatcgctgtctcgatctttac 388
Query: 181 tccgatttgggccacattaacgatgccttgaaggtgtttgatgatatttctcacaagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tccgatttgggccacattaacgatgccttgaaggtgtttgatgatatttctcacaagaat 448
Query: 241 tccacttcctggaacatttgcttaaaagggttgctcaaa 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tccacttcctggaacatttgcttaaaagggttgctcaaa 487
>gnl|LJGI|FS360680 similar to UniRef100_Q3DAM3 Cluster: Phenylalanyl-tRNA synthetase
beta subunit; n=1; Streptococcus agalactiae COH1|Rep:,
partial (2%)
Length = 732
Score = 115 bits (58), Expect = 1e-24
Identities = 137/162 (84%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 661 tgtcatagagccgggcaccatgagctggctctagcgcatttctataagatgcgggatgcg 720
||||||||||| |||| ||| ||||||||||||||||| ||| || || | | || | |
Sbjct: 491 tgtcatagagcagggctccaagagctggctctagcgcagttcgatcaggt-caggttact 433
Query: 721 gagttgttacctgaccagtttacgtgttcgactttgatgagtgtctgttctaacttgcga 780
||||||||||||||| |||||| |||||| | |||||| ||| |||||||||||||||
Sbjct: 432 gagttgttacctgacaagtttatgtgttcaatgttgatggatgtatgttctaacttgcga 373
Query: 781 gatttggacaagggtaagcaagtttttgccttctgtttcaag 822
||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 372 tatttggacaagggcaagcaatattttaccttctgtttcaag 331
Score = 97.6 bits (49), Expect = 2e-19
Identities = 112/131 (85%), Gaps = 4/131 (3%)
Strand = Plus / Minus
Query: 989 atgccctgcatctttttgttttaaccttgagggagaatattcggccaacggaatacatgg 1048
|||| |||||||||||| ||||||||||| |||||||||||| ||||| |||||||
Sbjct: 217 atgctctgcatctttttcctttaaccttgatagagaatattcggtagacggagtacatgg 158
Query: 1049 ttagctgtcttctgagttctttttccatatttttaccagtagaagtgggtatccaaatcc 1108
|||||||| ||||||||| | ||||||| |||||| ||||||||| |||| ||||||
Sbjct: 157 ttagctgtattctgagttatgtttccat-tttttatgagtagaagtaggta---aaatcc 102
Query: 1109 atgctttggtt 1119
|||||||||||
Sbjct: 101 atgctttggtt 91
Score = 77.8 bits (39), Expect = 2e-13
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 904 cggctatttacagaacaggatcgatgggatacagctctgtgcacttccatgatttcaagc 963
|||||||||||| ||| |||| |||||||||| ||||||| ||||||||||||||||||
Sbjct: 328 cggctatttacaaaacgagatcaatgggatacaactctgtgtacttccatgatttcaagc 269
Query: 964 tat 966
|||
Sbjct: 268 tat 266