Miyakogusa Predicted Gene
- Lj1g3v0911990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0911990.1 Non Chatacterized Hit- tr|I1JYZ7|I1JYZ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.14,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PENTATRICOPEPTIDE (PPR) REPEAT-CONTAI,CUFF.26508.1
(2023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318683 weakly similar to UniRef100_A7NSP9 Cluster: Ch... 1400 0.0
gnl|LJGI|FS345620 weakly similar to UniRef100_A7NSP9 Cluster: Ch... 1051 0.0
>gnl|LJGI|FS318683 weakly similar to UniRef100_A7NSP9 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 739
Score = 1400 bits (706), Expect = 0.0
Identities = 712/714 (99%)
Strand = Plus / Plus
Query: 1 atgagtatggagttgcaaggcatcggccgcacgcttcgcgaagggagacaactccacgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 atgagtatggagttgcaaggcatcggccgcacgcttcgcgaagggagacaactccacgtc 85
Query: 61 tccttcctcaaaaccggcattctgaactcctccctcaccaccgccaaccgcctactccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tccttcctcaaaaccggcattctgaactcctccctcaccaccgccaaccgcctactccaa 145
Query: 121 ttctactcccgccgcggatgtctcgacgacgccacccaactgttcgacgaaatgccccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttctactcccgccgcggatgtctcgacgacgccacccaactgttcgacgaaatgccccag 205
Query: 181 acaaacgccttctcctggaacactctcatcgaagcccacctccactccggccacagaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 acaaacgccttctcctggaacactctcatcgaagcccacctccactccggccacagaaac 265
Query: 241 gagtctctccgcttgttccacgccatgcccgagaagacacactactcctggaacatgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gagtctctccgcttgttccacgccatgcccgagaagacacactactcctggaacatgctg 325
Query: 301 gtttccgcgttcgccaagtccggtgaccttcaacttgctcattccctctttgactccatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtttccgcgttcgccaagtccggtgaccttcaacttgctcattccctctttgactccatg 385
Query: 361 ccatgtaagaatggcctcgtctggaacactatcattcatggctattccaaacgtgggcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccatgtaagaatggcctcgtctggaacactatcattcatggctattccaaacgtgggcat 445
Query: 421 cctcggaaagcgctttcgctattcaagaccatgagtttagaccccttagagatggtgcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cctcggaaagcgctttcgctattcaagaccatgagtttagaccccttagagatggtgcat 505
Query: 481 tgtgacgcgggcgtgttggcaactgttcttggtgcctgtgctgactgttttgctcttaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgtgacgcgggcgtgttggcaactgttcttggtgcctgtgctgactgttttgctcttaat 565
Query: 541 tgtgggaaacaagtccatgcccgtgtcatcgttgagggtattgagcttgaatttgacaag 600
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 566 tgtgggaaacaagtccatgcccgtgtcatcgttgatggtcttgagcttgaatttgacaag 625
Query: 601 gtcttgtgcagctcgcttgttaagttttatgggaaatgtggtgacttggatagcgctgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtcttgtgcagctcgcttgttaagttttatgggaaatgtggtgacttggatagcgctgct 685
Query: 661 cgcgttgcgggtgttgtgaaggaagtggatgatttctctttatctgctttggtt 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cgcgttgcgggtgttgtgaaggaagtggatgatttctctttatctgctttggtt 739
>gnl|LJGI|FS345620 weakly similar to UniRef100_A7NSP9 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 708
Score = 1051 bits (530), Expect = 0.0
Identities = 533/534 (99%)
Strand = Plus / Minus
Query: 1490 catggaatacaatattgatgggatatgctacaaatggatatggaagtgaagccctgaccc 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 catggaatacaatattgatgggatatgctacaaatggatatggaagtgaagccctgaccc 649
Query: 1550 tgtttagggaaatgaggtgtagtggtgtgaggccttctgccattacttttactgcagtcc 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tgtttagggaaatgaggtgtagtggtgtgaggccttctgccattacttttactgcagtcc 589
Query: 1610 tttcagcctgtgatcatactggtctagttgaagaaggaagaaatttgtttgacactatga 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tttcagcctgtgatcatactggtctagttgaagaaggaagaaatttgtttgacactatga 529
Query: 1670 agcataactataatataaatccagagattgaacattactcttgcatggttgatctttatg 1729
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 528 agcataactataatataaatccagggattgaacattactcttgcatggttgatctttatg 469
Query: 1730 cccgagctggttgcttaggggaagctatagatcttattgaagagatgccttttcaggctg 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cccgagctggttgcttaggggaagctatagatcttattgaagagatgccttttcaggctg 409
Query: 1790 atgcaaacatgtggttttcagtattgagaggctgcatagcccatggaaataggactattg 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atgcaaacatgtggttttcagtattgagaggctgcatagcccatggaaataggactattg 349
Query: 1850 gcaagatggctgctgagaaaatcattcagcttgaccctgaaaatccaggtgcttatatac 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gcaagatggctgctgagaaaatcattcagcttgaccctgaaaatccaggtgcttatatac 289
Query: 1910 aattatctaacgtacttgcgacttctgaggactgggaaggatcagcacaagtaagagagc 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aattatctaacgtacttgcgacttctgaggactgggaaggatcagcacaagtaagagagc 229
Query: 1970 tgatgatagataagaatgttcagaagattcctggttgcagttgggcagattagt 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tgatgatagataagaatgttcagaagattcctggttgcagttgggcagattagt 175