Miyakogusa Predicted Gene

Lj1g3v0900960.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0900960.1 tr|Q43486|Q43486_HORVU B32E protein OS=Hordeum
vulgare GN=B32E PE=2 SV=1,36.2,5e-19,GB DEF: SEED PROTEIN B32E
(FRAGMENT),NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL; seg,NULL;
GAT,,CUFF.26521.1
         (786 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63795 similar to UniRef100_A7NVL7 Cluster: Chromosome...  1509   0.0  
gnl|LJGI|TC66807 weakly similar to UniRef100_Q43486 Cluster: B32...   141   7e-33
gnl|LJGI|DC598843 similar to UniRef100_A7NVL7 Cluster: Chromosom...   100   3e-20

>gnl|LJGI|TC63795 similar to UniRef100_A7NVL7 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (83%)
          Length = 1966

 Score = 1509 bits (761), Expect = 0.0
 Identities = 778/786 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858  atgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaat 917

                                                                        
Query: 61   gacagccttcagcgagaactcgaccgacatgatgatatcgcaaaaggaactgctaattca 120
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918  gacagccttcagcgagtactcgaccgacatgatgatatcgcaaaaggaactgctaattca 977

                                                                        
Query: 121  ggtgcaagagaagctgatctgcctcttgtaaacgtaaaccatgaagatgatgagtccgaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978  ggtgcaagagaagctgatctgcctcttgtaaacgtaaaccatgaagatgatgagtccgaa 1037

                                                                        
Query: 181  gatgattttgctcaactggcccccaggtcatctcgagatactaatgcacagaatcggaaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gatgattttgctcaactggcccccaggtcatctcgagatactaatgcacagaatcggaaa 1097

                                                                        
Query: 241  ccagcctatgatgaggcagaatcggggagggtaaactcattttnnnnnnnaccaccagca 300
            |||||||||||||||||||||||||||||||||||||||||||       ||||||||||
Sbjct: 1098 ccagcctatgatgaggcagaatcggggagggtaaactcattttcccccccaccaccagca 1157

                                                                        
Query: 301  tcaaggaaaccagtctactctggcactggcgcggttgactaccttagcggtgatgcgtac 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 tcaaggaaaccagtctactctggcactggcgcggttgactaccttagcggtgatgcgtac 1217

                                                                        
Query: 361  aaggcagagggatcccgtgaaaactcagaaccaacttcattagcagttcccctagattcg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 aaggcagagggatcccgtgaaaactcagaaccaacttcattagcagttcccctagattcg 1277

                                                                        
Query: 421  agcctcaatcctaccgcatcactaatttttaacaaacagcctgtgtatgatgaaccatct 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 agcctcaatcctaccgcatcactaatttttaacaaacagcctgtgtatgatgaaccatct 1337

                                                                        
Query: 481  cctatgaacaaatcttcagaacatctgcctccagctccctgggacacaccatctcctgtc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 cctatgaacaaatcttcagaacatctgcctccagctccctgggacacaccatctcctgtc 1397

                                                                        
Query: 541  gtcattccacccccgccttcaaagcataatcagagacagcagttttttgagcaacatggt 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 gtcattccacccccgccttcaaagcataatcagagacagcagttttttgagcaacatggt 1457

                                                                        
Query: 601  ggatctcattctagtaatggatccagttcctctagtgacggcttggtgggacaaactcaa 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 ggatctcattctagtaatggatccagttcctctagtgacggcttggtgggacaaactcaa 1517

                                                                        
Query: 661  aatctctctctgaattcgtccaccccacccaaacaacagaagcctgaagatgcccttttc 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 aatctctctctgaattcgtccaccccacccaaacaacagaagcctgaagatgcccttttc 1577

                                                                        
Query: 721  aaagatcttgttgattttgcaaaatccaaaacctcttcatcttccaggcccaatagttca 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 aaagatcttgttgattttgcaaaatccaaaacctcttcatcttccaggcccaatagttca 1637

                  
Query: 781  tattga 786
            ||||||
Sbjct: 1638 tattga 1643


>gnl|LJGI|TC66807 weakly similar to UniRef100_Q43486 Cluster: B32E protein; n=1;
           Hordeum vulgare|Rep: B32E protein - Hordeum vulgare
           (Barley), partial (22%)
          Length = 596

 Score =  141 bits (71), Expect = 7e-33
 Identities = 248/307 (80%)
 Strand = Plus / Plus

                                                                       
Query: 447 ttttaacaaacagcctgtgtatgatgaaccatctcctatgaacaaatcttcagaacatct 506
           ||||| |||||||||| | |||||||||||||||||  | |||||||||||||||   ||
Sbjct: 36  ttttagcaaacagcctatatatgatgaaccatctccggtcaacaaatcttcagaaagcct 95

                                                                       
Query: 507 gcctccagctccctgggacacaccatctcctgtcgtcattccacccccgccttcaaagca 566
              |||||||||| ||||||| | |||||| |   || |||| || || ||  ||| |  
Sbjct: 96  ttttccagctcccggggacacgcaatctccaggaatccttccgcctccaccggcaaggtt 155

                                                                       
Query: 567 taatcagagacagcagttttttgagcaacatggtggatctcattctagtaatggatccag 626
           ||||||||| ||| | ||||||||| |||| ||    |||||||| |||||  | |||||
Sbjct: 156 taatcagaggcagaacttttttgaggaacaaggcatgtctcattcaagtaactggtccag 215

                                                                       
Query: 627 ttcctctagtgacggcttggtgggacaaactcaaaatctctctctgaattcgtccacccc 686
           |||||| | |||| ||||| ||||||||||||| ||||| ||||||||||| || || ||
Sbjct: 216 ttcctcgaatgacagcttgttgggacaaactcagaatctgtctctgaattcatctactcc 275

                                                                       
Query: 687 acccaaacaacagaagcctgaagatgcccttttcaaagatcttgttgattttgcaaaatc 746
           | |||||||| ||||||  ||||| |||||||||||||| ||  |||| |||||||||||
Sbjct: 276 aaccaaacaagagaagctagaagacgcccttttcaaagacctacttgactttgcaaaatc 335

                  
Query: 747 caaaacc 753
           |||||||
Sbjct: 336 caaaacc 342


>gnl|LJGI|DC598843 similar to UniRef100_A7NVL7 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 547

 Score = 99.6 bits (50), Expect = 3e-20
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaatg 61
           ||||||||||||||   |||||||||||  |||||||  |||||||||||||||| ||||
Sbjct: 132 tgcttcttgtgaatgcaactacggatgaacagcttttatgtcagggattggcactgaatg 191

                                                             
Query: 62  acagccttcagcgagaactcgaccgacatgatgatatcgcaaaaggaact 111
           ||||||||||||||| |||    |||||||||||||| | ||||||||||
Sbjct: 192 acagccttcagcgagtacttagtcgacatgatgatattgtaaaaggaact 241