Miyakogusa Predicted Gene
- Lj1g3v0900960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0900960.1 tr|Q43486|Q43486_HORVU B32E protein OS=Hordeum
vulgare GN=B32E PE=2 SV=1,36.2,5e-19,GB DEF: SEED PROTEIN B32E
(FRAGMENT),NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL; seg,NULL;
GAT,,CUFF.26521.1
(786 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63795 similar to UniRef100_A7NVL7 Cluster: Chromosome... 1509 0.0
gnl|LJGI|TC66807 weakly similar to UniRef100_Q43486 Cluster: B32... 141 7e-33
gnl|LJGI|DC598843 similar to UniRef100_A7NVL7 Cluster: Chromosom... 100 3e-20
>gnl|LJGI|TC63795 similar to UniRef100_A7NVL7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1966
Score = 1509 bits (761), Expect = 0.0
Identities = 778/786 (98%)
Strand = Plus / Plus
Query: 1 atgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 atgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaat 917
Query: 61 gacagccttcagcgagaactcgaccgacatgatgatatcgcaaaaggaactgctaattca 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 gacagccttcagcgagtactcgaccgacatgatgatatcgcaaaaggaactgctaattca 977
Query: 121 ggtgcaagagaagctgatctgcctcttgtaaacgtaaaccatgaagatgatgagtccgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 ggtgcaagagaagctgatctgcctcttgtaaacgtaaaccatgaagatgatgagtccgaa 1037
Query: 181 gatgattttgctcaactggcccccaggtcatctcgagatactaatgcacagaatcggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gatgattttgctcaactggcccccaggtcatctcgagatactaatgcacagaatcggaaa 1097
Query: 241 ccagcctatgatgaggcagaatcggggagggtaaactcattttnnnnnnnaccaccagca 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1098 ccagcctatgatgaggcagaatcggggagggtaaactcattttcccccccaccaccagca 1157
Query: 301 tcaaggaaaccagtctactctggcactggcgcggttgactaccttagcggtgatgcgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 tcaaggaaaccagtctactctggcactggcgcggttgactaccttagcggtgatgcgtac 1217
Query: 361 aaggcagagggatcccgtgaaaactcagaaccaacttcattagcagttcccctagattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 aaggcagagggatcccgtgaaaactcagaaccaacttcattagcagttcccctagattcg 1277
Query: 421 agcctcaatcctaccgcatcactaatttttaacaaacagcctgtgtatgatgaaccatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 agcctcaatcctaccgcatcactaatttttaacaaacagcctgtgtatgatgaaccatct 1337
Query: 481 cctatgaacaaatcttcagaacatctgcctccagctccctgggacacaccatctcctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 cctatgaacaaatcttcagaacatctgcctccagctccctgggacacaccatctcctgtc 1397
Query: 541 gtcattccacccccgccttcaaagcataatcagagacagcagttttttgagcaacatggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 gtcattccacccccgccttcaaagcataatcagagacagcagttttttgagcaacatggt 1457
Query: 601 ggatctcattctagtaatggatccagttcctctagtgacggcttggtgggacaaactcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 ggatctcattctagtaatggatccagttcctctagtgacggcttggtgggacaaactcaa 1517
Query: 661 aatctctctctgaattcgtccaccccacccaaacaacagaagcctgaagatgcccttttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 aatctctctctgaattcgtccaccccacccaaacaacagaagcctgaagatgcccttttc 1577
Query: 721 aaagatcttgttgattttgcaaaatccaaaacctcttcatcttccaggcccaatagttca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 aaagatcttgttgattttgcaaaatccaaaacctcttcatcttccaggcccaatagttca 1637
Query: 781 tattga 786
||||||
Sbjct: 1638 tattga 1643
>gnl|LJGI|TC66807 weakly similar to UniRef100_Q43486 Cluster: B32E protein; n=1;
Hordeum vulgare|Rep: B32E protein - Hordeum vulgare
(Barley), partial (22%)
Length = 596
Score = 141 bits (71), Expect = 7e-33
Identities = 248/307 (80%)
Strand = Plus / Plus
Query: 447 ttttaacaaacagcctgtgtatgatgaaccatctcctatgaacaaatcttcagaacatct 506
||||| |||||||||| | ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 36 ttttagcaaacagcctatatatgatgaaccatctccggtcaacaaatcttcagaaagcct 95
Query: 507 gcctccagctccctgggacacaccatctcctgtcgtcattccacccccgccttcaaagca 566
|||||||||| ||||||| | |||||| | || |||| || || || ||| |
Sbjct: 96 ttttccagctcccggggacacgcaatctccaggaatccttccgcctccaccggcaaggtt 155
Query: 567 taatcagagacagcagttttttgagcaacatggtggatctcattctagtaatggatccag 626
||||||||| ||| | ||||||||| |||| || |||||||| ||||| | |||||
Sbjct: 156 taatcagaggcagaacttttttgaggaacaaggcatgtctcattcaagtaactggtccag 215
Query: 627 ttcctctagtgacggcttggtgggacaaactcaaaatctctctctgaattcgtccacccc 686
|||||| | |||| ||||| ||||||||||||| ||||| ||||||||||| || || ||
Sbjct: 216 ttcctcgaatgacagcttgttgggacaaactcagaatctgtctctgaattcatctactcc 275
Query: 687 acccaaacaacagaagcctgaagatgcccttttcaaagatcttgttgattttgcaaaatc 746
| |||||||| |||||| ||||| |||||||||||||| || |||| |||||||||||
Sbjct: 276 aaccaaacaagagaagctagaagacgcccttttcaaagacctacttgactttgcaaaatc 335
Query: 747 caaaacc 753
|||||||
Sbjct: 336 caaaacc 342
>gnl|LJGI|DC598843 similar to UniRef100_A7NVL7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 547
Score = 99.6 bits (50), Expect = 3e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 2 tgcttcttgtgaataatactacggatgaggagcttttgagtcagggattggcactaaatg 61
|||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||
Sbjct: 132 tgcttcttgtgaatgcaactacggatgaacagcttttatgtcagggattggcactgaatg 191
Query: 62 acagccttcagcgagaactcgaccgacatgatgatatcgcaaaaggaact 111
||||||||||||||| ||| |||||||||||||| | ||||||||||
Sbjct: 192 acagccttcagcgagtacttagtcgacatgatgatattgtaaaaggaact 241