Miyakogusa Predicted Gene

Lj1g3v0900940.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0900940.1 Non Chatacterized Hit- tr|F6HUJ2|F6HUJ2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.31,1e-18,Staygreen,Staygreen protein; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.26503.1
         (762 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69267 weakly similar to UniRef100_Q9LNZ8 Cluster: F9C...   684   0.0  

>gnl|LJGI|TC69267 weakly similar to UniRef100_Q9LNZ8 Cluster: F9C16.20; n=1;
           Arabidopsis thaliana|Rep: F9C16.20 - Arabidopsis
           thaliana (Mouse-ear cress), partial (28%)
          Length = 576

 Score =  684 bits (345), Expect = 0.0
 Identities = 359/366 (98%)
 Strand = Plus / Plus

                                                                       
Query: 397 aaaaatgaaatgtgtctccatgttcattgctttgtcagtggtcccaatcccttcctggat 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaaatgaaatgtgtctccatgttcattgctttgtcagtggtcccaatcccttcctggat 60

                                                                       
Query: 457 ctggctgctgaatttagatatcacatattctccaaggaaatgcctttggtactcaaagca 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggctgctgaatttagatatcacatattctccaaggaaatgcctttggtactcaaagca 120

                                                                       
Query: 517 attcaatatggagattctgtacttttccatgagcacccggaattactagattccatagtc 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attcaatatggagattctgtacttttccatgagcacccggaattactagattccatagtc 180

                                                                       
Query: 577 cgaatttattttcattcaagctcnnnnnnntacaacagaatggaatgttgggggcctcta 636
           |||||||||||||||||||||||       ||||||||||||||||||||||||||||||
Sbjct: 181 cgaatttattttcattcaagctcaaaaaaatacaacagaatggaatgttgggggcctcta 240

                                                                       
Query: 637 aaggatgcaatggagggaaaacaagcggatcagatccaaggtttaataagcagagattgt 696
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggatgcaatggagggaaaacaagcggatcagatccaaggtttaataagcagagattgt 300

                                                                       
Query: 697 cctcctgaaaagtgtcggagcccaaagtccatcttccaagctctttttgcttttcttctt 756
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcctgaaaagtgtcggagcccaaagtccatcttccaagctctttttgcttttcttctt 360

                 
Query: 757 tgaaat 762
           ||||||
Sbjct: 361 tgaaat 366