Miyakogusa Predicted Gene

Lj1g3v0874360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0874360.1 tr|F2EAP6|F2EAP6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,25.1,3e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.26457.1
         (1448 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV422239 similar to UniRef100_A7NVH9 Cluster: Chromosom...   767   0.0  

>gnl|LJGI|AV422239 similar to UniRef100_A7NVH9 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 387

 Score =  767 bits (387), Expect = 0.0
 Identities = 387/387 (100%)
 Strand = Plus / Plus

                                                                       
Query: 273 gaggaattacgcgcacaccgtcagggcgtaccacttgatgattgagtctttggccaggat 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaggaattacgcgcacaccgtcagggcgtaccacttgatgattgagtctttggccaggat 60

                                                                       
Query: 333 taggcagtatcagatcatgtgggacattgtcacgaaaatgaggaacaagggcatgctaaa 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taggcagtatcagatcatgtgggacattgtcacgaaaatgaggaacaagggcatgctaaa 120

                                                                       
Query: 393 tgttgaaactttttgtattgttatgcgaaagtatgctagggctcacaaggtggatgaggc 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttgaaactttttgtattgttatgcgaaagtatgctagggctcacaaggtggatgaggc 180

                                                                       
Query: 453 ggtttacacgtttaacgtcatggataagtatgaggtgcctcagaatcttgctgcttttaa 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtttacacgtttaacgtcatggataagtatgaggtgcctcagaatcttgctgcttttaa 240

                                                                       
Query: 513 tggtttgctgagtgctttgtgtaagtctaggaatgtgaggaaggctcaggagatttttga 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtttgctgagtgctttgtgtaagtctaggaatgtgaggaaggctcaggagatttttga 300

                                                                       
Query: 573 tagtatgaagggtcgcttcgagccggatttgaaaacttatagcatattgcttgaggggtg 632
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtatgaagggtcgcttcgagccggatttgaaaacttatagcatattgcttgaggggtg 360

                                      
Query: 633 gggaaaggatccgaatcttcccaaagc 659
           |||||||||||||||||||||||||||
Sbjct: 361 gggaaaggatccgaatcttcccaaagc 387