Miyakogusa Predicted Gene
- Lj1g3v0874330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0874330.1 tr|G7KJI9|G7KJI9_MEDTR PHD-finger family protein
expressed OS=Medicago truncatula GN=MTR_6g044600
PE,34.27,1e-18,seg,NULL,CUFF.26504.1
(1248 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75931 similar to UniRef100_A7PB64 Cluster: Chromosome... 714 0.0
gnl|LJGI|BW596591 similar to UniRef100_Q40458 Cluster: 23 kDa po... 597 e-170
gnl|LJGI|TC63383 homologue to UniRef100_Q7CTN6 Cluster: Transcri... 515 e-145
gnl|LJGI|BP058055 291 5e-78
gnl|LJGI|TC77914 240 2e-62
>gnl|LJGI|TC75931 similar to UniRef100_A7PB64 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 998
Score = 714 bits (360), Expect = 0.0
Identities = 441/467 (94%), Gaps = 2/467 (0%)
Strand = Plus / Plus
Query: 782 actatagaggattgatgaataacatgatcaataatgatttagctctgaaaggaaatttgg 841
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 103 actatagaggattgatgaattacatgatcaataatgatttagctctgaaaggaaatttgg 162
Query: 842 atggggttgagcttttaatttttccatccaacgttctgcccgagagatcccagctttgga 901
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 163 atggggttgagcttttaatttttccatccaacattctgcctgagagatcccagctttgga 222
Query: 902 accagaagatgttcctctggggtgtattcaaagtgcaaaaggtgaataacttagcaaaca 961
|||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 223 accagatgatgttcctctggggcgtattcaaagtgcaaaaggtgaataactcagcaaaca 282
Query: 962 caccagtctcaaattctctgaagcaaggaaatagagatacggtgaaaaggggggcaattg 1021
||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 283 caccagtgtcaaattctctgaagcaaggaaatggagatactgtgaaaaggggggcaattg 342
Query: 1022 atctcaatgcgtatactgaagatgcaaatgttgacagaggtcttaatcttacagtgcagg 1081
|||||||||| ||||||||||||| |||||||| || | |||||||||| |||||||||
Sbjct: 343 atctcaatgcatatactgaagatgaaaatgttggcacaaatcttaatcttgcagtgcagg 402
Query: 1082 gtagaagcacaacaccagaaaatggttctgttaggattgagcaccatgttaaggagctac 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtagaagcacaacaccagaaaatggttctgttaggattgagcaccatgttaaggagctac 462
Query: 1142 caacatcactctctcctgtaccgccttcaactgtggaaaatatggatcggcgtgattggg 1201
|||||||||||||||| | ||||| |||||| ||||||||||||| | |||||||||||
Sbjct: 463 caacatcactctctccagcaccgcgttcaac--tggaaaatatggacccgcgtgattggg 520
Query: 1202 acgctgcggaagctttgattcttctctctagtggttggttttgaatg 1248
||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 521 acgctgcggaagctttggttcttctctctagtgggaggttttgaatg 567
>gnl|LJGI|BW596591 similar to UniRef100_Q40458 Cluster: 23 kDa polypeptide of
water-oxidizing complex of photosystem II; n=1;
Nicotiana tabacum|Rep: 23 kDa polypeptide of
water-oxidizing complex of photosystem II - Nicotiana
tabacum (Common tobacco), partial (6%)
Length = 484
Score = 597 bits (301), Expect = e-170
Identities = 307/309 (99%)
Strand = Plus / Plus
Query: 1 atggcatctgattgtgcgttttcaaaggaatcaaatgctactggttctaaggttctccca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 176 atggcatctgattgtgcgttttcaaaggaatcaaatgctattggttctaaggttctccca 235
Query: 61 gcagatgcgtatgtgctaaataatcctccaatgagcttactagcttctgattctgctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gcagatgcgtatgtgctaaataatcctccaatgagcttactagcttctgattctgctgta 295
Query: 121 actgcactaaagaaggaaaaaggaactatttctggtggtgattcttatttttcaggatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 actgcactaaagaaggaaaaaggaactatttctggtggtgattcttatttttcaggatcc 355
Query: 181 cgtttttgtaatcctgatgttgttggaggttcaggacaatcagatcatagatctcggcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 356 cgtttttgtaatcctgatgttgttggaggttcaggacaatcagatcatagatcacggcga 415
Query: 241 agcatttacaaatctcacaaagattcaggatcccgtttttgtaatcctgatgttgttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcatttacaaatctcacaaagattcaggatcccgtttttgtaatcctgatgttgttgga 475
Query: 301 ggtttagga 309
|||||||||
Sbjct: 476 ggtttagga 484
Score = 176 bits (89), Expect = 2e-43
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 264 ttcaggatcccgtttttgtaatcctgatgttgttggaggtttaggacaatcagatcatag 323
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 346 ttcaggatcccgtttttgtaatcctgatgttgttggaggttcaggacaatcagatcatag 405
Query: 324 atcacggccaagcatttacaaatctcacaaagattca 360
|||||||| ||||||||||||||||||||||||||||
Sbjct: 406 atcacggcgaagcatttacaaatctcacaaagattca 442
>gnl|LJGI|TC63383 homologue to UniRef100_Q7CTN6 Cluster: Transcriptional regulator,
GntR family; n=1; Agrobacterium tumefaciens str.
C58|Rep: Transcriptional regulator, GntR family -
Agrobacterium tumefaciens (strain C58 / ATCC 33970),
partial (6%)
Length = 869
Score = 515 bits (260), Expect = e-145
Identities = 336/360 (93%), Gaps = 1/360 (0%)
Strand = Plus / Plus
Query: 264 ttcaggatcccgtttttgtaatcctgatgttgttggaggtttaggacaatcagatcatag 323
||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||
Sbjct: 511 ttcaggatcccgtttttgtaatcctgatggtgttggaagatcaggacaatcagatcatag 570
Query: 324 atcacggccaagcatttacaaatctcacaaagattcaaactctacaaataaaaagaagaa 383
|||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 571 atcacggccaagcatttacaaaactcacaaaggttcaaactctaccaataaaaagaagaa 630
Query: 384 aaatgtgagccaacaagctaaacaccctgcaaaagttgttgctcctatgactggtcctgc 443
||||||||||||||||||| ||| ||||||||||| || || |||||||||||||||||
Sbjct: 631 aaatgtgagccaacaagctgaacgccctgcaaaagctgccgcccctatgactggtcctgc 690
Query: 444 ttctggtgaaatgtgccccttgagagacttggcccaggttgaggcaacagtcctcttaca 503
||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 691 ttctgatgaaatgccccccttgagagacttggcccaggttgaggcagcaaccctcttaca 750
Query: 504 gggctgtgtcgtcccaaatactgatcattcatggctaggcaaatttctgatacacaacag 563
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gggccttgtcgtcccaaatactgatcattcatggctaggcaaatttctgatacacaacag 810
Query: 564 tgagggcattccaaggaattgtgatgggattctagctcatttatcaaattgtgcatcact 623
||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 811 tgagggcattccatggaattgtgatggggttctagctcatttatc-aattgtgcatcact 869
Score = 371 bits (187), Expect = e-102
Identities = 247/267 (92%)
Strand = Plus / Plus
Query: 1 atggcatctgattgtgcgttttcaaaggaatcaaatgctactggttctaaggttctccca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 341 atggcatctgattgtgcgttttcaaaggaatcaaatgctactggttctaaggttctccta 400
Query: 61 gcagatgcgtatgtgctaaataatcctccaatgagcttactagcttctgattctgctgta 120
|| ||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 401 gcggattcgtatgagctaaataatcatccaatgagcttactagcttcggattctgctgta 460
Query: 121 actgcactaaagaaggaaaaaggaactatttctggtggtgattcttatttttcaggatcc 180
||||| |||||||||||||| || |||||||||||| ||| |||||||||||||||||
Sbjct: 461 gctgcaggaaagaaggaaaaagaaattatttctggtggcgatacttatttttcaggatcc 520
Query: 181 cgtttttgtaatcctgatgttgttggaggttcaggacaatcagatcatagatctcggcga 240
||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |||| |
Sbjct: 521 cgtttttgtaatcctgatggtgttggaagatcaggacaatcagatcatagatcacggcca 580
Query: 241 agcatttacaaatctcacaaagattca 267
|||||||||||| ||||||||| ||||
Sbjct: 581 agcatttacaaaactcacaaaggttca 607
>gnl|LJGI|BP058055
Length = 470
Score = 291 bits (147), Expect = 5e-78
Identities = 165/171 (96%)
Strand = Plus / Minus
Query: 1078 cagggtagaagcacaacaccagaaaatggttctgttaggattgagcaccatgttaaggag 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cagggtagaagcacaacaccagaaaatggttctgttaggattgagcaccatgttaaggag 310
Query: 1138 ctaccaacatcactctctcctgtaccgccttcaactgtggaaaatatggatcggcgtgat 1197
|||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||
Sbjct: 309 ctaccaacatcactctctcctgcaccgccttcaactgtggaaaatatagacctacgtgat 250
Query: 1198 tgggacgctgcggaagctttgattcttctctctagtggttggttttgaatg 1248
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 249 tgggacgctgcggaagctttgattcttctctctagtggtttgttttgaatg 199
Score = 196 bits (99), Expect = 2e-49
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 1136 agctaccaacatcactctctcctgtaccgccttcaactgtggaaaatatggatcggcgtg 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agctaccaacatcactctctcctgtaccgccttcaactgtggaaaatatggatcggcgtg 411
Query: 1196 attgggacgctgcggaagctttgattcttctctctagtg 1234
|||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attgggacgctgcggaagctttgattcttctctctagtg 372
>gnl|LJGI|TC77914
Length = 746
Score = 240 bits (121), Expect = 2e-62
Identities = 160/173 (92%)
Strand = Plus / Plus
Query: 1 atggcatctgattgtgcgttttcaaaggaatcaaatgctactggttctaaggttctccca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 574 atggcatctgattgtgcgttttcaaaggaatcaaatgctactggttctaaggttctccta 633
Query: 61 gcagatgcgtatgtgctaaataatcctccaatgagcttactagcttctgattctgctgta 120
|| ||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 634 gcggattcgtatgagctaaataatcatccaatgagcttactagcttcggattctgctgta 693
Query: 121 actgcactaaagaaggaaaaaggaactatttctggtggtgattcttatttttc 173
||||| |||||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 694 gctgcaggaaagaaggaaaaagaaattatttctggtggcgatacttatttttc 746