Miyakogusa Predicted Gene
- Lj1g3v0861790.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0861790.2 Non Chatacterized Hit- tr|H3E5C3|H3E5C3_PRIPA
Uncharacterized protein OS=Pristionchus pacificus
GN=W,35.46,0.000000000000001,BTB,BTB/POZ; POZ domain,BTB/POZ fold; no
description,BTB/POZ fold; Broad-Complex, Tramtrack and
Bric,CUFF.26437.2
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO015310 similar to UniRef100_A7NVE2 Cluster: Chromosom... 694 0.0
gnl|LJGI|GO005306 weakly similar to UniRef100_A7NVE2 Cluster: Ch... 151 1e-35
gnl|LJGI|TC72041 similar to UniRef100_A7NVE2 Cluster: Chromosome... 90 3e-17
gnl|LJGI|TC75412 similar to UniRef100_A7NVE2 Cluster: Chromosome... 60 3e-08
>gnl|LJGI|GO015310 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 661
Score = 694 bits (350), Expect = 0.0
Identities = 362/366 (98%)
Strand = Plus / Minus
Query: 712 ttgctcgcagcagctaataaatatgacattggaggtttgaaaggttgctgtgaggaaagc 771
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 661 ttgctcgcagcagttaataaatatgacattggaggtttgaaaggttgttgtgaggaaagc 602
Query: 772 cttcttgaagatcttaactcaggaaatgttcttcagatgctaagtgaggcttggttttat 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcttgaagatcttaactcaggaaatgttcttcagatgctaagtgaggcttggttttat 542
Query: 832 caattacataagttaaagaaagagtgtatggtgttcttgtttgaatttggtaaaatatat 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caattacataagttaaagaaagagtgtatggtgttcttgtttgaatttggtaaaatatat 482
Query: 892 gatgttagtggtgatgaaatgaataccttcttccagcatgcagataaggagttaatcgtg 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgttagtggtgatgaaatgaataccttcttccagcatgcagataaggagttaatcgtg 422
Query: 952 gagatgtttcaggagatgcttacaattccgaacccggtagatgaaacttcaattcacata 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagatgtttcaggagatgcttacaattccgaacccggtagatgaaacttcaattcacata 362
Query: 1012 ggaagaggaaatcagtatggatggaagatgattgttggagctaacttgagttggcaaagc 1071
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 ggaaggggaaatcagtatggatggaagatgattgttggagctgacttgagttggcaaagc 302
Query: 1072 tggtga 1077
||||||
Sbjct: 301 tggtga 296
>gnl|LJGI|GO005306 weakly similar to UniRef100_A7NVE2 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 142
Score = 151 bits (76), Expect = 1e-35
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 atggttgatgatagggtggatacaattggccgattagcacagtggaaagtcgacaaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 63 atggttgatgatagggtggatacaattggccgattagcacagtggaaagtcgataaccta 122
Query: 61 ggaccttcttcctgcaaaaa 80
||||||||||||||||||||
Sbjct: 123 ggaccttcttcctgcaaaaa 142
>gnl|LJGI|TC72041 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 620
Score = 89.7 bits (45), Expect = 3e-17
Identities = 159/197 (80%)
Strand = Plus / Plus
Query: 607 tctacaatccatatagaagacatgtcactcgaatcctgcaaggctctaatcagctacttt 666
||||| ||||| || ||||||||||||| |||||||||||| || | ||||||||
Sbjct: 9 tctacgatccacatggaagacatgtcacgacgatcctgcaaggcccttctgagctacttg 68
Query: 667 tacggaacaattaaacaagaagatttttggaaacaccggcttccattgctcgcagcagct 726
||||| ||||| ||||| | |||||| ||||| ||| ||||| | ||||||| ||||||
Sbjct: 69 tacggcacaatcaaacatgcagatttctggaagcacaggcttgcgttgctcggagcagcc 128
Query: 727 aataaatatgacattggaggtttgaaaggttgctgtgaggaaagccttcttgaagatctt 786
||||||| || ||||| | | | |||| | |||||||||||||| || || ||||||
Sbjct: 129 aataaattcgaaattggtgatctcaaagatgcttgtgaggaaagcctgctggatgatctt 188
Query: 787 aactcaggaaatgttct 803
| |||||||||||||||
Sbjct: 189 acctcaggaaatgttct 205
>gnl|LJGI|TC75412 similar to UniRef100_A7NVE2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 652
Score = 60.0 bits (30), Expect = 3e-08
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 326 ttggccgcttcattattgatgttgagtttctagacctgaagatatgcactatgaaaggtg 385
|||| |||||||| ||||||||||| ||||| |||||||| || | | ||| || ||||
Sbjct: 371 ttggtcgcttcatcattgatgttgaatttcttgacctgaaaatctaccctacgagtggtg 430
Query: 386 aagaagctagttctatatggccatctgatggaaatttgctatccgttgcagctcaaag 443
|| ||| |||| |||||||||||||| ||||| ||| ||| |||||| |||||||
Sbjct: 431 gagtagccggttccatatggccatctgacggaaaactgcaatctgttgcatctcaaag 488