Miyakogusa Predicted Gene
- Lj1g3v0841310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0841310.1 tr|Q9MB13|Q9MB13_ORYSA Protein disulfide
isomerase (Fragment) OS=Oryza sativa GN=Pdi PE=2
SV=1,42.24,0.00000000000004,coiled-coil,NULL; ER_PDI_fam: protein
disulfide isomerases,Protein disulphide isomerase; pdi_dom:
pr,CUFF.26463.1
(1530 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71852 similar to UniRef100_P29828 Cluster: Protein di... 3033 0.0
gnl|LJGI|BW626278 similar to UniRef100_A7NVF0 Cluster: Chromosom... 749 0.0
gnl|LJGI|GO016766 similar to UniRef100_P29828 Cluster: Protein d... 573 e-162
gnl|LJGI|BP037707 similar to UniRef100_P29828 Cluster: Protein d... 555 e-157
gnl|LJGI|AU089472 355 5e-97
gnl|LJGI|GO036353 similar to UniRef100_A7NVF0 Cluster: Chromosom... 349 3e-95
gnl|LJGI|AV779075 similar to UniRef100_Q4KJL9 Cluster: Sec-indep... 155 1e-36
gnl|LJGI|BI420984 homologue to UniRef100_Q84V95 Cluster: Pyruvat... 60 4e-08
gnl|LJGI|TC72404 similar to UniRef100_P38661 Cluster: Probable p... 60 4e-08
>gnl|LJGI|TC71852 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
precursor; n=1; Medicago sativa|Rep: Protein
disulfide-isomerase precursor - Medicago sativa
(Alfalfa), partial (89%)
Length = 1875
Score = 3033 bits (1530), Expect = 0.0
Identities = 1530/1530 (100%)
Strand = Plus / Plus
Query: 1 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 130
Query: 61 tcgcagatccatgcgattgaatcggaggctaaggagttcgtgctcacattggataactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tcgcagatccatgcgattgaatcggaggctaaggagttcgtgctcacattggataactcc 190
Query: 121 aatttttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aatttttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtgg 250
Query: 181 tgtggacactgcaagaatcttgctcctgagtatgagaaggctgctgcggtcttgagtagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgtggacactgcaagaatcttgctcctgagtatgagaaggctgctgcggtcttgagtagc 310
Query: 241 catgatcctccgattgttttggctaaagttgatgccaatgaggagaacaacaaggacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 catgatcctccgattgttttggctaaagttgatgccaatgaggagaacaacaaggacctt 370
Query: 301 gcatctcagtatgaggttcggggattcccaacgattaagattctgagaaacggtggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gcatctcagtatgaggttcggggattcccaacgattaagattctgagaaacggtggaaag 430
Query: 361 gacagtcaagaatacaaaggaccccgtgaagccgatggtattgttgactatttgaaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gacagtcaagaatacaaaggaccccgtgaagccgatggtattgttgactatttgaaaaag 490
Query: 421 cagactggtcctgcatccactgaaattaaatctgctgatgatgccactgctttcattggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cagactggtcctgcatccactgaaattaaatctgctgatgatgccactgctttcattggt 550
Query: 481 acaaagaaaattgttattgttggagttttccccaaattttccggggaggagttcgataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acaaagaaaattgttattgttggagttttccccaaattttccggggaggagttcgataac 610
Query: 541 ttctttgcattggcagagaaactgcgatctgattatgactttggtcacactttggatgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttctttgcattggcagagaaactgcgatctgattatgactttggtcacactttggatgcc 670
Query: 601 aaaaaccttccacggggtgaatcttccgtgagtgggcctgttgttaggttgttcaagcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaaaaccttccacggggtgaatcttccgtgagtgggcctgttgttaggttgttcaagcca 730
Query: 661 tttgacgagctttttgttgactccaaggaattcaatgtcgaagctctggagaaatttatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tttgacgagctttttgttgactccaaggaattcaatgtcgaagctctggagaaatttatt 790
Query: 721 gaagaatctagtatccctgttgtgactgtctttaacaatgacccaagcaaccaccctttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaagaatctagtatccctgttgtgactgtctttaacaatgacccaagcaaccaccctttt 850
Query: 781 gtttccaaattctttaacagccaaaacccaaaggcaatgttgttcatcaacttcactgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gtttccaaattctttaacagccaaaacccaaaggcaatgttgttcatcaacttcactgct 910
Query: 841 gaaggtgctgaatctatccaagcaaaataccgtgaagccgctgaggaatatagaaagcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gaaggtgctgaatctatccaagcaaaataccgtgaagccgctgaggaatatagaaagcag 970
Query: 901 gacgtaagctttctggtgggagatgttgaggccagtcaaggtgccttccagtatttcggg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 gacgtaagctttctggtgggagatgttgaggccagtcaaggtgccttccagtatttcggg 1030
Query: 961 ctaaaggaagaagatgttcctctaatcatcattcaacaaactgatggcaagaaatttttc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ctaaaggaagaagatgttcctctaatcatcattcaacaaactgatggcaagaaatttttc 1090
Query: 1021 aagcctcagctggaagctgatcagatttcatcttggttgaaggcatacaaggatggaaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 aagcctcagctggaagctgatcagatttcatcttggttgaaggcatacaaggatggaaat 1150
Query: 1081 gttgcaccatatgtcaagtctgagcctattcctgaaacaaacaatgaacctgttaaagtg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gttgcaccatatgtcaagtctgagcctattcctgaaacaaacaatgaacctgttaaagtg 1210
Query: 1141 gtagttggggacagtcttcaagatgtagttttcaagtctggaaagaatgttctgctcgag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 gtagttggggacagtcttcaagatgtagttttcaagtctggaaagaatgttctgctcgag 1270
Query: 1201 ttttatgctccttggtgtggtcactgcaagagtctggctccaatactggatgaagttgct 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 ttttatgctccttggtgtggtcactgcaagagtctggctccaatactggatgaagttgct 1330
Query: 1261 gtctcatatcaaaatgatgctgatattgttattgcaaaatttgacgcaactgccaatgat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 gtctcatatcaaaatgatgctgatattgttattgcaaaatttgacgcaactgccaatgat 1390
Query: 1321 gtcccaactgaaagctttgaagtccaaggttatccaactctgtacttcatttcatcaagt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 gtcccaactgaaagctttgaagtccaaggttatccaactctgtacttcatttcatcaagt 1450
Query: 1381 ggaaaaatttcaccttatgatggcggcaggaccaaggaagacatcatacaattcattgaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 ggaaaaatttcaccttatgatggcggcaggaccaaggaagacatcatacaattcattgaa 1510
Query: 1441 aacagccgggataagaaatctactcagatagaagaagagcaaggaaaagatgagattcag 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 aacagccgggataagaaatctactcagatagaagaagagcaaggaaaagatgagattcag 1570
Query: 1501 caagaaaaaccaaaggacgagctttgaaag 1530
||||||||||||||||||||||||||||||
Sbjct: 1571 caagaaaaaccaaaggacgagctttgaaag 1600
>gnl|LJGI|BW626278 similar to UniRef100_A7NVF0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 482
Score = 749 bits (378), Expect = 0.0
Identities = 381/382 (99%)
Strand = Plus / Plus
Query: 1 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 160
Query: 61 tcgcagatccatgcgattgaatcggaggctaaggagttcgtgctcacattggataactcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 161 tcgcagatccatgcgattgaatcggaggctaaggagttcgtgctcacattggatgactcc 220
Query: 121 aatttttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aatttttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtgg 280
Query: 181 tgtggacactgcaagaatcttgctcctgagtatgagaaggctgctgcggtcttgagtagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgtggacactgcaagaatcttgctcctgagtatgagaaggctgctgcggtcttgagtagc 340
Query: 241 catgatcctccgattgttttggctaaagttgatgccaatgaggagaacaacaaggacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 catgatcctccgattgttttggctaaagttgatgccaatgaggagaacaacaaggacctt 400
Query: 301 gcatctcagtatgaggttcggggattcccaacgattaagattctgagaaacggtggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gcatctcagtatgaggttcggggattcccaacgattaagattctgagaaacggtggaaag 460
Query: 361 gacagtcaagaatacaaaggac 382
||||||||||||||||||||||
Sbjct: 461 gacagtcaagaatacaaaggac 482
>gnl|LJGI|GO016766 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
precursor; n=1; Medicago sativa|Rep: Protein
disulfide-isomerase precursor - Medicago sativa
(Alfalfa), partial (14%)
Length = 937
Score = 573 bits (289), Expect = e-162
Identities = 295/297 (99%)
Strand = Plus / Minus
Query: 1234 ctggctccaatactggatgaagttgctgtctcatatcaaaatgatgctgatattgttatt 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctggctccaatactggatgaagttgctgtctcatatcaaaatgatgctgatattgttatt 428
Query: 1294 gcaaaatttgacgcaactgccaatgatgtcccaactgaaagctttgaagtccaaggttat 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcaaaatttgacgcaactgccaatgatgtcccaactgaaagctttgaagtccaaggttat 368
Query: 1354 ccaactctgtacttcatttcatcaagtggaaaaatttcaccttatgatggcggcaggacc 1413
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccaactctgtacttcatttcattaagtggaaaaatttcaccttatgatggcggcaggacc 308
Query: 1414 aaggaagacatcatacaattcattgaaaacagccgggataagaaatctactcagatagaa 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaggaagacatcatacaattcattgaaaacagccgggataagaaatctactcagatagaa 248
Query: 1474 gaagagcaaggaaaagatgagattcagcaagaaaaaccaaaggacgagctttgaaag 1530
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaagagcagggaaaagatgagattcagcaagaaaaaccaaaggacgagctttgaaag 191
>gnl|LJGI|BP037707 similar to UniRef100_P29828 Cluster: Protein disulfide-isomerase
precursor; n=1; Medicago sativa|Rep: Protein
disulfide-isomerase precursor - Medicago sativa
(Alfalfa), partial (19%)
Length = 465
Score = 555 bits (280), Expect = e-157
Identities = 298/304 (98%)
Strand = Plus / Minus
Query: 1000 actgatggcaagaaatttttcaagcctcagctggaagctgatcagatttcatcttggttg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 actgatggcaagaaatttttcaagcctcagctggaagctgatcagatttcatcttggttg 406
Query: 1060 aaggcatacaaggatggaaatgttgcaccatatgtcaagtctgagcctattcctgaaaca 1119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaggcatacaaggatggaaatgttgcaccatatgtcaagtctgagcctattcctgaaacc 346
Query: 1120 aacaatgaacctgttaaagtggtagttggggacagtcttcaagatgtagttttcaagtct 1179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaccatgaacctgttaaagtggtagttggggacagtcttcaagatgtagttttcaagtct 286
Query: 1180 ggaaagaatgttctgctcgagttttatgctccttggtgtggtcactgcaagagtctggct 1239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 285 ggaaagaatgttctgctcgagttttatgctccttggtgtggtcactgccagagtctggct 226
Query: 1240 ccaatactggatgaagttgctgtctcatatcaaaatgatgctgatattgttattgcaaaa 1299
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 225 cccatactggatgaagttgctgtctcatatccaaatgatgctgatattgttattgccaaa 166
Query: 1300 tttg 1303
||||
Sbjct: 165 tttg 162
>gnl|LJGI|AU089472
Length = 444
Score = 355 bits (179), Expect = 5e-97
Identities = 268/284 (94%), Gaps = 12/284 (4%)
Strand = Plus / Plus
Query: 1 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggcgagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttct 109
Query: 61 tcgcagatccatgcgattgaatcggaggctaa-ggagttcgtgctcacatt-ggataact 118
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 110 tcgcagatccatgcgattgaatcggaggctaagggagttcgtgctcacattgggataact 169
Query: 119 ccaatttttctgaaattgtcagcaagcacgatttcatcg-ttgtt--gaattctacg-ca 174
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||
Sbjct: 170 ccaatttttctgaaattgtcagcaagcacgatttcatcgtttgtttgaaattctacgcca 229
Query: 175 ccgtgg-tgt-ggacactgcaag-aatcttgctcctgagtatgagaaggctgctgc-ggt 230
|||||| ||| |||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct: 230 ccgtggttgtgggacactgcaagaaatcttgctcctgagtatganaaggctgctgcgggt 289
Query: 231 cttg-agtagccatgatcctccgattg-ttttggctaaagttga 272
|||| | || ||||||||||||||||| ||||||||||||||||
Sbjct: 290 cttgaattanccatgatcctccgattgtttttggctaaagttga 333
>gnl|LJGI|GO036353 similar to UniRef100_A7NVF0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 627
Score = 349 bits (176), Expect = 3e-95
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 6 gagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttcttcgca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggtttcgatttgcttcctcttcgcgttcgctctctctgtcctcctcgcttcttcgca 60
Query: 66 gatccatgcgattgaatcggaggctaaggagttcgtgctcacattggataactccaattt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatccatgcgattgaatcggaggctaaggagttcgtgctcacattggataactccaattt 120
Query: 126 ttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgaaattgtcagcaagcacgatttcatcgttgttgaattctacgcaccgtggt 176
Score = 67.9 bits (34), Expect = 2e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 179 ggtgtggacactgcaagaatcttgctcctgagta 212
||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgtggacactgcaagaatcttgctcctgagta 574
>gnl|LJGI|AV779075 similar to UniRef100_Q4KJL9 Cluster: Sec-independent protein
translocase TatC; n=1; Pseudomonas fluorescens Pf-5|Rep:
Sec-independent protein translocase TatC - Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477), partial (5%)
Length = 415
Score = 155 bits (78), Expect = 1e-36
Identities = 114/126 (90%)
Strand = Plus / Minus
Query: 1398 tgatggcggcaggaccaaggaagacatcatacaattcattgaaaacagccgggataagaa 1457
|||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||
Sbjct: 415 tgatggcggccggacccaggaagacatcatactattcattggttgcagccgggataagaa 356
Query: 1458 atctactcagatagaagaagagcaaggaaaagatgagattcagcaagaaaaaccaaagga 1517
|||||||||||||||||||||||||||||||||||||||||||| || | ||| |||||
Sbjct: 355 atctactcagatagaagaagagcaaggaaaagatgagattcagcgagtgagacccaagga 296
Query: 1518 cgagct 1523
||||||
Sbjct: 295 cgagct 290
>gnl|LJGI|BI420984 homologue to UniRef100_Q84V95 Cluster: Pyruvate decarboxylase 1;
n=1; Lotus corniculatus|Rep: Pyruvate decarboxylase 1 -
Lotus corniculatus (Bird's-foot trefoil), partial (26%)
Length = 533
Score = 60.0 bits (30), Expect = 4e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 398 gtattgttgactatttgaaaaagcagactg 427
||||||||||||||||||||||||||||||
Sbjct: 19 gtattgttgactatttgaaaaagcagactg 48
>gnl|LJGI|TC72404 similar to UniRef100_P38661 Cluster: Probable protein
disulfide-isomerase A6 precursor; n=1; Medicago
sativa|Rep: Probable protein disulfide-isomerase A6
precursor - Medicago sativa (Alfalfa), partial (95%)
Length = 1561
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 166 ttctacgcaccgtggtgtggacactgcaagaatcttgctcctgagtatga 215
|||||||| || |||||||||||||||||||| |||||||| || |||||
Sbjct: 291 ttctacgctccttggtgtggacactgcaagaagcttgctccggaatatga 340