Miyakogusa Predicted Gene
- Lj1g3v0815000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0815000.1 tr|G7ZYM9|G7ZYM9_MEDTR FBD-associated F-box
protein OS=Medicago truncatula GN=MTR_076s0012 PE=4 SV=1,32.8,6e-19,no
description,NULL; LRR_2,Leucine-rich repeat 2,CUFF.26368.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO013243 464 e-130
gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 240 8e-63
gnl|LJGI|TC65372 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 208 3e-53
gnl|LJGI|TC66247 100 2e-20
gnl|LJGI|FS357881 similar to UniRef100_A4VR91 Cluster: Protein i... 98 8e-20
gnl|LJGI|BP076293 98 8e-20
gnl|LJGI|TC77415 92 5e-18
gnl|LJGI|TC74171 88 7e-17
gnl|LJGI|TC76014 similar to UniRef100_A0Q6X7 Cluster: Methionine... 80 2e-14
gnl|LJGI|TC81149 76 3e-13
gnl|LJGI|GO005265 similar to UniRef100_A5N307 Cluster: Predicted... 68 7e-11
gnl|LJGI|TC77475 68 7e-11
gnl|LJGI|TC80357 66 3e-10
gnl|LJGI|BP050969 60 2e-08
gnl|LJGI|TC61418 weakly similar to UniRef100_Q9T0F1 Cluster: F-b... 60 2e-08
gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chr... 56 3e-07
>gnl|LJGI|GO013243
Length = 667
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 361 acacatgttgagcttgtctatcaaccctataattctgattggtctcaggtagtggaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acacatgttgagcttgtctatcaaccctataattctgattggtctcaggtagtggaattc 60
Query: 421 ctccatcattgccctaagcttcaagttctcctcataaaccagccaaattttcatagcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctccatcattgccctaagcttcaagttctcctcataaaccagccaaattttcatagcttt 120
Query: 481 gactctgagcaaattggaaaaataggagattggcaattcccatcaaccattcctgaatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gactctgagcaaattggaaaaataggagattggcaattcccatcaaccattcctgaatgc 180
Query: 541 attctattacaccttagaagatgctatctaaatgattatagaggcaccaaaccg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attctattacaccttagaagatgctatctaaatgattatagaggcaccaaaccg 234
>gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (17%)
Length = 741
Score = 240 bits (121), Expect = 8e-63
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1 atggatttcattccgttttcgtcggatgttcatttgccctcactcaaagtcctgcatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggatttcattccgttttcgtcggatgttcatttgccctcactcaaagtcctgcatcta 680
Query: 61 caagatttgattttcttagaacgcgaatctctcgcaaagcttctttctggatctccaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagatttgattttcttagaacgcgaatctctcgcaaagcttctttctggatctccaaat 740
Query: 121 c 121
|
Sbjct: 741 c 741
>gnl|LJGI|TC65372 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (14%)
Length = 905
Score = 208 bits (105), Expect = 3e-53
Identities = 218/255 (85%), Gaps = 3/255 (1%)
Strand = Plus / Plus
Query: 339 tttccccatgtttcacaatttaacacatgttgagcttgtctatcaaccctataattctga 398
||||||||||||||||||||||| ||| || |||||||||| |||| ||||||| || |
Sbjct: 321 tttccccatgtttcacaatttaatccatcttcagcttgtctaccaacgctataatgctca 380
Query: 399 ttggtctcaggtagtggaattcctccatcattgccctaagcttcaagttctcctcataaa 458
|||||||||||| ||||||| |||||||||||||| ||||||||| |||| ||||||
Sbjct: 381 ttggtctcaggtgctggaattgctccatcattgccccaagcttcaacttcttgccataaa 440
Query: 459 ccagccaaattttcatagctttgactctgagcaaattggaaaaataggagattggcaatt 518
|||||| || ||||||||||| ||| ||| |||||| ||| |||||| ||||||||
Sbjct: 441 ccagccggatattcatagctttcactttgaacaaatt---caaaaaggagagtggcaatt 497
Query: 519 cccatcaaccattcctgaatgcattctattacaccttagaagatgctatctaaatgatta 578
||| || | ||||| ||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 498 accaccatctgttcctcaatgccttctattacaccttaaaagatgctatctaaatcatta 557
Query: 579 tagaggcaccaaacc 593
|||||||||||||||
Sbjct: 558 tagaggcaccaaacc 572
>gnl|LJGI|TC66247
Length = 631
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 531 tcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcacc 588
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 367 tcctgaatgcattctattacaccttaaaagttgctatctaaatgattatagaggcacc 424
>gnl|LJGI|FS357881 similar to UniRef100_A4VR91 Cluster: Protein involved in catabolism
of external DNA; n=1; Pseudomonas stutzeri A1501|Rep:
Protein involved in catabolism of external DNA -
Pseudomonas stutzeri (strain A1501), partial (8%)
Length = 723
Score = 97.6 bits (49), Expect = 8e-20
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 333 ctacattttccccatgtttcacaatttaacacatgttgagcttgtctatcaaccctataa 392
|||| ||||||||||||||||||||||||| ||| ||||||||| ||| | || ||
Sbjct: 580 ctacgttttccccatgtttcacaatttaacccatcttgagcttgaatatagatgttacaa 521
Query: 393 ttctgattggtctcaggtagtggaattcctccatcattgccctaagcttcaagttctcct 452
| | ||||||||||||| |||||||| ||||| |||||||| | ||||||||||||| |
Sbjct: 520 tgataattggtctcaggtggtggaattgctccagcattgccccatgcttcaagttctcgt 461
Query: 453 cataaaccagcca 465
||| |||||||||
Sbjct: 460 cattaaccagcca 448
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 169 gatagagagtttaaaaccttacccaagttgctcagagcaga 209
|||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 723 gatacagagtttaaaacattaccaaagttgctcagagcaga 683
>gnl|LJGI|BP076293
Length = 485
Score = 97.6 bits (49), Expect = 8e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 531 tcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcac 587
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 tcctgaatgcattcaattacaccttaaaagatgctatctaaatgattatagaggcac 387
>gnl|LJGI|TC77415
Length = 889
Score = 91.7 bits (46), Expect = 5e-18
Identities = 115/138 (83%)
Strand = Plus / Plus
Query: 337 attttccccatgtttcacaatttaacacatgttgagcttgtctatcaaccctataattct 396
|||||||| ||||||||||||||||| ||| ||||||||| ||| | |||||| |
Sbjct: 157 attttccctatgtttcacaatttaacccatcttgagcttgaatatagatgttataatgat 216
Query: 397 gattggtctcaggtagtggaattcctccatcattgccctaagcttcaagttctcctcata 456
||||||||||||| |||||||| ||||| |||||||| |||||||||||||| |||
Sbjct: 217 aattggtctcaggtggtggaattgctccagcattgccccaagcttcaagttcttgtcact 276
Query: 457 aaccagccaaattttcat 474
|||||||| ||||||||
Sbjct: 277 aaccagccgtattttcat 294
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 531 tcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcac 587
||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 354 tcctgaatgcattttgttacaccttaaaagatgctatctaaatgattatagaggcac 410
>gnl|LJGI|TC74171
Length = 595
Score = 87.7 bits (44), Expect = 7e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 508 gattggcaattcccatcaaccattcctgaatgcattctattacaccttagaagatgctat 567
|||||||||| ||||||| | ||||| ||||||||||||| ||||||| | |||||||
Sbjct: 228 gattggcaatacccatcatctgttcctaaatgcattctatttcaccttaaagaatgctat 287
Query: 568 ctaaatgattatagaggcaccaaa 591
|||||| |||||||||||||||||
Sbjct: 288 ctaaataattatagaggcaccaaa 311
>gnl|LJGI|TC76014 similar to UniRef100_A0Q6X7 Cluster: Methionine uptake transporter
(MUT) family protein; n=2; Francisella tularensis subsp.
novicida|Rep: Methionine uptake transporter (MUT) family
protein - Francisella tularensis subsp. novicida (strain
U112), partial (5%)
Length = 691
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 530 ttcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcacca 589
||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||
Sbjct: 260 ttcctgaatacattctattacggcttaaaagatgctatctaaatgagtatagaggcacca 319
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 338 ttttccccatgtttcacaatttaacacatgttga 371
||||||||||||||||||||||||| ||| ||||
Sbjct: 74 ttttccccatgtttcacaatttaacccatattga 107
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 428 attgccctaagcttcaagttctcctcataaaccagcca 465
||||||| |||||||||||||| ||||||||||||||
Sbjct: 167 attgcccccagcttcaagttctcgtcataaaccagcca 204
>gnl|LJGI|TC81149
Length = 438
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 530 ttcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcacca 589
||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 81 ttcctaaatgcattctactacaccttaaagtttgctatctaaatgattatagaggcacca 140
Query: 590 aa 591
||
Sbjct: 141 aa 142
>gnl|LJGI|GO005265 similar to UniRef100_A5N307 Cluster: Predicted transporter protein;
n=1; Clostridium kluyveri DSM 555|Rep: Predicted
transporter protein - Clostridium kluyveri DSM 555,
partial (5%)
Length = 721
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 530 ttcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcacca 589
||||||||||||||||| ||||||||| |||||| | |||||||| || || ||||||||
Sbjct: 294 ttcctgaatgcattctactacaccttaaaagatgttgtctaaatggttttataggcacca 353
Query: 590 aa 591
||
Sbjct: 354 aa 355
>gnl|LJGI|TC77475
Length = 509
Score = 67.9 bits (34), Expect = 7e-11
Identities = 53/57 (92%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 533 ctgaatgcattctattacaccttagaag-atgctatctaaatgattatagaggcacc 588
|||| |||||||||||||||||| |||| ||||||||||||||||||||||| ||||
Sbjct: 1 ctgagtgcattctattacacctt-gaagaatgctatctaaatgattatagagncacc 56
>gnl|LJGI|TC80357
Length = 742
Score = 65.9 bits (33), Expect = 3e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 507 agattggcaattcccatcaaccattcctgaatgcattctattacaccttagaagatgcta 566
||||||||||| ||||||| | ||||||||||||||||| | ||||| | | |||||
Sbjct: 345 agattggcaatacccatcatctgttcctgaatgcattctactgcacctcaaagaatgctg 404
Query: 567 tctaaatgattatagaggcac 587
||||||| |||||||||||||
Sbjct: 405 tctaaatcattatagaggcac 425
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 174 agagtttaaaaccttacccaagttgctcagagcagatatttcag 217
|||||||| ||| |||||||||||| ||||||| ||||||||||
Sbjct: 66 agagtttataactttacccaagttggtcagagcggatatttcag 109
>gnl|LJGI|BP050969
Length = 557
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 176 agtttaaaaccttacccaagttgctcagagcagatatttcag 217
|||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 538 agtttaaaactttacccaagttggtcagagcacatatttcag 497
Score = 52.0 bits (26), Expect = 4e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 530 ttcctgaatgcattctattacaccttagaagatgctatctaaatgattatagaggcac 587
||||| ||||||||||| |||||||| | ||||||| ||||||||||| |||||||
Sbjct: 122 ttcctaaatgcattctacgacaccttaaagaatgctatttaaatgattatcgaggcac 65
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 397 gattggtctcaggtagtggaattcctccatcattgccctaagcttcaagttctcctcata 456
||||||| | ||||||||||||| ||| |||||||| ||||||||| |||| ||||
Sbjct: 252 gattggtttgaggtagtggaatttctcacgcattgccccaagcttcaaactctcgtcatt 193
Query: 457 aaccagccaaattttcat 474
| ||||||||| ||||||
Sbjct: 192 agccagccaaagtttcat 175
>gnl|LJGI|TC61418 weakly similar to UniRef100_Q9T0F1 Cluster: F-box protein
At4g09920; n=1; Arabidopsis thaliana|Rep: F-box protein
At4g09920 - Arabidopsis thaliana (Mouse-ear cress),
partial (5%)
Length = 740
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 176 agtttaaaaccttacccaagttgctcagagcagatatttcag 217
|||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 117 agtttaaaactttacccaagttggtcagagcacatatttcag 158
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 397 gattggtctcaggtagtggaattcctccatcattgccctaagcttcaagttctcctcata 456
||||||| | ||||||||||||| ||| |||||||| ||||||||| |||| ||||
Sbjct: 317 gattggtttgaggtagtggaatttctcacgcattgccccaagcttcaaactctcgtcatt 376
Query: 457 aaccagccaaattttcat 474
| ||||||||| ||||||
Sbjct: 377 agccagccaaagtttcat 394
>gnl|LJGI|TC60968 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 1563
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 333 ctacattttccccatgtttcacaatttaacacatgttgagcttg 376
||||||||||||||||||||||||||| || ||| |||| ||||
Sbjct: 915 ctacattttccccatgtttcacaatttgacccatattgaacttg 958