Miyakogusa Predicted Gene
- Lj1g3v0809800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0809800.1 Non Chatacterized Hit- tr|I3SLG6|I3SLG6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.1,0,ABC_TRANSPORTER_1,ABC transporter, conserved site;
seg,NULL; ABC_tran,ABC transporter-like; P-loop
c,NODE_18783_length_2302_cov_120.989143.path2.1
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV413975 similar to UniRef100_A7QHZ1 Cluster: Chromosom... 676 0.0
gnl|LJGI|AV418183 similar to UniRef100_A7QHZ1 Cluster: Chromosom... 587 e-167
gnl|LJGI|TC79010 135 5e-31
gnl|LJGI|TC64957 similar to UniRef100_A7P469 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|AV413975 similar to UniRef100_A7QHZ1 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 343
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Plus
Query: 50 gatcctctatatctggtctttccggattgtatacagtagttatgaaagccgcaggtgcga 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gatcctctatatctggtctttccggattgtatacagtagttatgaaagccgcaggtgcga 62
Query: 110 gcagaagggtatttcaaattatggatcgtgtctcatccatgtctaagtcaggaactaaat 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcagaagggtatttcaaattatggatcgtgtctcatccatgtctaagtcaggaactaaat 122
Query: 170 gtcctctgggtgatcaagatggggaagtggaactggatgatgtatggttttcctacccat 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtcctctgggtgatcaagatggggaagtggaactggatgatgtatggttttcctacccat 182
Query: 230 ctcgcccaagtcatccagtgctcaagggcattacaatgaaactgcaccctggctcaaagg 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcgcccaagtcatccagtgctcaagggcattacaatgaaactgcaccctggctcaaagg 242
Query: 290 ttgctcttgttggtcctagtggtggtggaaagactacaattgcaaacttaattgaaagat 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttgctcttgttggtcctagtggtggtggaaagactacaattgcaaacttaattgaaagat 302
Query: 350 tttatgacccaaccaagggaaagattctgctgaatggggtt 390
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tttatgacccaaccaagggaaagattctgctgaatggggtt 343
>gnl|LJGI|AV418183 similar to UniRef100_A7QHZ1 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 298
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 385 ggggttcctctggcagaaatatcacacaggcatttacacagaaagatcagtatcgtgagc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggggttcctctggcagaaatatcacacaggcatttacacagaaagatcagtatcgtgagc 62
Query: 445 caagagcctacactcttcaactgttccatagaggagaacatagcttatggatttgatggc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 caagagcctacactcttcaactgttccatagaggagaacatagcttatggatttgatggc 122
Query: 505 aaactcaactctgttgatatagaaaatgcagctaaaatggccaatgcgcacgagttcata 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aaactcaactctgttgatatagaaaatgcagctaaaatggccaatgcgcacgagttcata 182
Query: 565 tcaaaatttccggaaaaataccagacttttgttggagagcgtggggtaaggctttctgga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcaaaatttccggaaaaataccagacttttgttggagagcgtggggtaaggctttctgga 242
Query: 625 gggcagaaacagagaatagcaattgctagagccctccttatggaccccaaaattct 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gggcagaaacagagaatagcaattgctagagccctccttatggaccccaaaattct 298
>gnl|LJGI|TC79010
Length = 631
Score = 135 bits (68), Expect = 5e-31
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 711 tgctgaaagtgaatacctagtgcaggatgccatggattctatcatgaagggaagaacagt 770
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tgctgaaagtgaatacttagtgcaggatgccatggattctatcatgaagggaaggacagt 60
Query: 771 tctagtcattactcataggt 790
|||||||||| |||||||||
Sbjct: 61 tctagtcattgctcataggt 80
>gnl|LJGI|TC64957 similar to UniRef100_A7P469 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 734
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 619 tctggagggcagaaacagagaatagcaattgctagagc 656
|||||||||||||| ||||| |||||||||||| ||||
Sbjct: 153 tctggagggcagaagcagaggatagcaattgctcgagc 190