Miyakogusa Predicted Gene
- Lj1g3v0806470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0806470.1 Non Chatacterized Hit- tr|B7FIG2|B7FIG2_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,74.72,0,seg,NULL; EamA,Drug/metabolite transporter;
Multidrug resistance efflux transporter EmrE,NULL; FAMIL,CUFF.26352.1
(873 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AW163925 similar to UniRef100_A7NVB3 Cluster: Chromosom... 710 0.0
gnl|LJGI|TC62215 weakly similar to UniRef100_A7NVB2 Cluster: Chr... 172 2e-42
gnl|LJGI|TC57890 similar to UniRef100_A7NVB2 Cluster: Chromosome... 103 2e-21
>gnl|LJGI|AW163925 similar to UniRef100_A7NVB3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 391
Score = 710 bits (358), Expect = 0.0
Identities = 378/382 (98%), Gaps = 2/382 (0%)
Strand = Plus / Plus
Query: 249 gataatggcgctcgcatttttggagccagtgattgatcaagggttcactttcttgggaat 308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11 gataatggcgctcgcatttttggagccagtgattgatcaagg-ttcactttcttgggaat 69
Query: 309 gcaatatacttcagcatcctttgcatctgctatgatgaatgctgtgccctccgtcacctt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gcaatatacttcagcatcctttgcatctgctatgatgaatgctgtgccctccgtcacctt 129
Query: 369 tgtgctagctttaattctcagattagagcgtgtaaatcttaagcagatacaaggcatagc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgtgctagctttaattctcagattagagcgtgtaaatcttaagcagatacaaggcatagc 189
Query: 429 taaggtgattgggacgttggttacatttggaggggcattagtaatgacactttacaaagg 488
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcaagtgattgggacgttggttacatttggaggggcattagtaatgacactttacaaagg 249
Query: 489 ccctcttattaaccttttgagttcttcaaaaacaagccaccaccaaaatggaactcactc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccctcttattaaccttttgagttcttcaaaaacaagccaccaccaaaatggaactcactc 309
Query: 549 ccctcagagtc-ccaggcactggatctcagggactctctttctgctccttggttgtttgg 607
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccctcagagtctccaggcactggatctcagggactctctttctgctccttggttgtttgg 369
Query: 608 cttggtcatccttcttcatttt 629
||||||||||||||||||||||
Sbjct: 370 cttggtcatccttcttcatttt 391
>gnl|LJGI|TC62215 weakly similar to UniRef100_A7NVB2 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 782
Score = 172 bits (87), Expect = 2e-42
Identities = 291/359 (81%)
Strand = Plus / Plus
Query: 46 gcaaagccttatttgttaactgtggggctgcagtttgggtttgcaggagcatacatcatt 105
||||||||||||||||| || |||||| |||| |||||| | || ||| ||||| | |
Sbjct: 67 gcaaagccttatttgttcacagtggggttgcaatttgggatggctggaacatacgtgttc 126
Query: 106 tccatggccagtatcaaccatggaatgaatcgttttgtgttcattgtttatcgcaatgtc 165
|||||||||| | || ||||| |||| ||| || |||||| |||| || |||||||||
Sbjct: 127 agcatggccagtctgaatcatgggatgagtcgcttggtgttcgttgtgtaccgcaatgtc 186
Query: 166 attgctgcaattgctctggctccttttgcactgatttttgaaaggaaagttaggccaaag 225
|| |||||| |||| || ||||| |||||| || | ||||||||||| |||||| |||
Sbjct: 187 atcgctgcagttgcgctcgctccgtttgcattgttctttgaaaggaagactaggccgaag 246
Query: 226 atgacaatctctgtctttatgcagataatggcgctcgcatttttggagccagtgattgat 285
|||||| ||||||| || | || ||| | || || | |||| | |||||||| ||||||
Sbjct: 247 atgacactctctgtgttcgtacaaatactagctcttggatttcttgagccagtaattgat 306
Query: 286 caagggttcactttcttgggaatgcaatatacttcagcatcctttgcatctgctatgatg 345
||||| |||||||||||||| |||||||| || ||||| || ||||||||| || | |||
Sbjct: 307 caaggcttcactttcttggggatgcaatacacctcagcttcatttgcatcttctgtcatg 366
Query: 346 aatgctgtgccctccgtcacctttgtgctagctttaattctcagattagagcgtgtaaa 404
|| || || |||||||| ||||||||| |||| |||| ||||| ||||||||||||||
Sbjct: 367 aacgccgtaccctccgtgacctttgtgttagcagtaatactcaggttagagcgtgtaaa 425
>gnl|LJGI|TC57890 similar to UniRef100_A7NVB2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 1248
Score = 103 bits (52), Expect = 2e-21
Identities = 112/132 (84%)
Strand = Plus / Plus
Query: 273 gccagtgattgatcaagggttcactttcttgggaatgcaatatacttcagcatcctttgc 332
|||||| ||||||||||| |||||||||||||| |||||||| || ||||| || |||||
Sbjct: 212 gccagtaattgatcaaggcttcactttcttggggatgcaatacacctcagcttcatttgc 271
Query: 333 atctgctatgatgaatgctgtgccctccgtcacctttgtgctagctttaattctcagatt 392
|||| || | ||||| || || |||||||| ||||||||| ||| |||| ||||| ||
Sbjct: 272 atcttctgtcatgaacgccgtaccctccgtgacctttgtgttagtagtaatactcaggtt 331
Query: 393 agagcgtgtaaa 404
||||||||||||
Sbjct: 332 agagcgtgtaaa 343