Miyakogusa Predicted Gene
- Lj1g3v0796420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0796420.1 Non Chatacterized Hit- tr|B1XM46|B1XM46_SYNP2
Putative uncharacterized protein OS=Synechococcus sp.
,45.65,2e-16,DUF836,Glutaredoxin-like; seg,NULL; no
description,Thioredoxin-like fold;
Thioredoxin-like,Thioredox,CUFF.26350.1
(423 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66370 similar to UniRef100_A7NVB1 Cluster: Chromosome... 831 0.0
gnl|LJGI|AV766543 homologue to UniRef100_A7NVB1 Cluster: Chromos... 163 1e-39
>gnl|LJGI|TC66370 similar to UniRef100_A7NVB1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 607
Score = 831 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 atggtggcggttgttactgcagcaagggcggtggcagtgttcgccgcagcgcgaccctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atggtggcggttgttactgcagcaagggcggtggcagtgttcgccgcagcgcgaccctcc 84
Query: 61 tcccctatttcgccgttaaccagacacagcacttttagattcagaactctctcttgttca 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 85 tcccctatttcgccgttaaccagacacagcacttttagatccagaactctctcttgttca 144
Query: 121 tcggaaccttctagaaagctcatcctttactccaaacccggttgctgtttgtgcgatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcggaaccttctagaaagctcatcctttactccaaacccggttgctgtttgtgcgatggc 204
Query: 181 ctcaaagagaagcttcatgcagcgttcttgctttctggccctgattccctcaccgacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcaaagagaagcttcatgcagcgttcttgctttctggccctgattccctcaccgacgtt 264
Query: 241 catctccaggtacgggatataactagcaatcctgaatgggaaagtgcttatcaatatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catctccaggtacgggatataactagcaatcctgaatgggaaagtgcttatcaatatgag 324
Query: 301 atacctgtgctggctaaagttctctctgatggcactgagaaaactttaccacgtttgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atacctgtgctggctaaagttctctctgatggcactgagaaaactttaccacgtttgtct 384
Query: 361 ccacggctaggagtgttgcacgtccagaagaagatagctgctgctttgagagaacaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccacggctaggagtgttgcacgtccagaagaagatagctgctgctttgagagaacaataa 444
Query: 421 agg 423
|||
Sbjct: 445 agg 447
>gnl|LJGI|AV766543 homologue to UniRef100_A7NVB1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 314
Score = 163 bits (82), Expect = 1e-39
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 342 aactttaccacgtttgtctccacggctaggagtgttgcacgtccagaagaagatagctgc 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aactttaccacgtttgtctccacggctaggagtgttgcacgtccagaagaagatagctgc 255
Query: 402 tgctttgagagaacaataaagg 423
||||||||||||||||||||||
Sbjct: 254 tgctttgagagaacaataaagg 233