Miyakogusa Predicted Gene

Lj1g3v0786340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0786340.1 Non Chatacterized Hit- tr|E0CR89|E0CR89_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,84.21,0.0000000004,no description,YbaK/aminoacyl-tRNA
synthetase-associated
domain,NODE_82763_length_157_cov_20.656052.path2.1
         (114 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69933 similar to UniRef100_A7NVA5 Cluster: Chromosome...   218   5e-57
gnl|LJGI|TC63639 similar to UniRef100_A7NVA5 Cluster: Chromosome...   186   2e-47

>gnl|LJGI|TC69933 similar to UniRef100_A7NVA5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1311

 Score =  218 bits (110), Expect = 5e-57
 Identities = 113/114 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtctctcaaaggaacaacttctagcacggttacaggagcttcaaattgaattttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32  atgggtctctcaaaggaacaacttctagcacggttacaggagcttcaaattgaattttcc 91

                                                                 
Query: 61  aagtatgagcatccagttgttttgactgttgaagcccaggcaaaatatgttgga 114
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  aagtacgagcatccagttgttttgactgttgaagcccaggcaaaatatgttgga 145


>gnl|LJGI|TC63639 similar to UniRef100_A7NVA5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 787

 Score =  186 bits (94), Expect = 2e-47
 Identities = 109/114 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtctctcaaaggaacaacttctagcacggttacaggagcttcaaattgaattttcc 60
           ||||||||||| ||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 99  atgggtctctcgaaggaacaacttctaacgcagttacaggagcttcaaattgaattttcc 158

                                                                 
Query: 61  aagtatgagcatccagttgttttgactgttgaagcccaggcaaaatatgttgga 114
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aagtatgagcatccacttgttttgactgttgaagcccaggcaaaatatgttgga 212