Miyakogusa Predicted Gene

Lj1g3v0786310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0786310.1 Non Chatacterized Hit- tr|I3S6J5|I3S6J5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,95.12,0.00000000000006,no description,YbaK/aminoacyl-tRNA
synthetase-associated domain; YbaK/ProRS associated
domain,YbaK/a,NODE_92560_length_75_cov_124.626663.path2.1
         (123 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69933 similar to UniRef100_A7NVA5 Cluster: Chromosome...   244   1e-64
gnl|LJGI|TC63639 similar to UniRef100_A7NVA5 Cluster: Chromosome...   212   3e-55

>gnl|LJGI|TC69933 similar to UniRef100_A7NVA5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1311

 Score =  244 bits (123), Expect = 1e-64
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacccgaagaggctttaggtgaaatacttcaggtacccttgggttctgtcactcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atggcacccgaagaggctttaggtgaaatacttcaggtacccttgggttctgtcactcca 346

                                                                       
Query: 61  tttgcagtagtaaatgaatctgcacgagatgtttcactgttattggatcaaggattcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tttgcagtagtaaatgaatctgcacgagatgtttcactgttattggatcaaggattcaag 406

              
Query: 121 aca 123
           |||
Sbjct: 407 aca 409


>gnl|LJGI|TC63639 similar to UniRef100_A7NVA5 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 787

 Score =  212 bits (107), Expect = 3e-55
 Identities = 119/123 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacccgaagaggctttaggtgaaatacttcaggtacccttgggttctgtcactcca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 354 atggcacccgaagaggctttaggtgaaatacttcaggtacccttgggttgcgtcactcca 413

                                                                       
Query: 61  tttgcagtagtaaatgaatctgcacgagatgtttcactgttattggatcaaggattcaag 120
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tttgcacttgtaaatgaatctgcacgagatgtttcactgttattggatcaaggattcaag 473

              
Query: 121 aca 123
           |||
Sbjct: 474 aca 476