Miyakogusa Predicted Gene
- Lj1g3v0762230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0762230.1 Non Chatacterized Hit- tr|I3SY75|I3SY75_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.39,0,Ribosomal_S13,Ribosomal protein S13; bact_S13: 30S
ribosomal protein S13,Ribosomal protein S13, bact,CUFF.26266.1
(495 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61679 similar to UniRef100_P42732 Cluster: 30S riboso... 981 0.0
gnl|LJGI|TC70243 similar to UniRef100_P42732 Cluster: 30S riboso... 973 0.0
>gnl|LJGI|TC61679 similar to UniRef100_P42732 Cluster: 30S ribosomal protein S13,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
30S ribosomal protein S13, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (80%)
Length = 711
Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 1 atggcacaaacgctggcaatgcccgttgcaccctctctcgccgcaatcagcaacggccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 atggcacaaacgctggcaatgcccgttgcaccctctctcgccgcaatcagcaacggccac 103
Query: 61 caccacttctccagcagagtttcccttcctgttgccaacactcccaaggttcaggggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 caccacttctccagcagagtttcccttcctgttgccaacactcccaaggttcaggggttg 163
Query: 121 agcatcaaatcggttcgtgttggcggtgttgagattccaaacaataagcgaattgaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 agcatcaaatcggttcgtgttggcggtgttgagattccaaacaataagcgaattgaattc 223
Query: 181 tcattgcagtatattcatggagttgggagggtcagagcgcggaagatcctctgtgacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tcattgcagtatattcatggagttgggagggtcagagcgcggaagatcctctgtgacctc 283
Query: 241 aacatggataacaaaatcaccaaggagctttctgaggaggagctcatcactctcagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aacatggataacaaaatcaccaaggagctttctgaggaggagctcatcactctcagggat 343
Query: 301 gaagtttccaaatacatgattgaaggagacttgcgacggttcaacgcgactaatataaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaagtttccaaatacatgattgaaggagacttgcgacggttcaacgcgactaatataaag 403
Query: 361 agattgaaggatatccagtgttacagaggcataaggcacattcaggggcttccttgcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agattgaaggatatccagtgttacagaggcataaggcacattcaggggcttccttgcaga 463
Query: 421 ggacagcgtactaagaacaattgcaggaccttgaagggtaagaaggttgccattgctggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggacagcgtactaagaacaattgcaggaccttgaagggtaagaaggttgccattgctggc 523
Query: 481 aagaagaagaagtaa 495
|||||||||||||||
Sbjct: 524 aagaagaagaagtaa 538
>gnl|LJGI|TC70243 similar to UniRef100_P42732 Cluster: 30S ribosomal protein S13,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
30S ribosomal protein S13, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (80%)
Length = 740
Score = 973 bits (491), Expect = 0.0
Identities = 494/495 (99%)
Strand = Plus / Plus
Query: 1 atggcacaaacgctggcaatgcccgttgcaccctctctcgccgcaatcagcaacggccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggcacaaacgctggcaatgcccgttgcaccctctctcgccgcaatcagcaacggccac 81
Query: 61 caccacttctccagcagagtttcccttcctgttgccaacactcccaaggttcaggggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 caccacttctccagcagagtttcccttcctgttgccaacactcccaaggttcaggggttg 141
Query: 121 agcatcaaatcggttcgtgttggcggtgttgagattccaaacaataagcgaattgaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 agcatcaaatcggttcgtgttggcggtgttgagattccaaacaataagcgaattgaattc 201
Query: 181 tcattgcagtatattcatggagttgggagggtcagagcgcggaagatcctctgtgacctc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 tcattgcagtatattcatggagttgggaggctcagagcgcggaagatcctctgtgacctc 261
Query: 241 aacatggataacaaaatcaccaaggagctttctgaggaggagctcatcactctcagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacatggataacaaaatcaccaaggagctttctgaggaggagctcatcactctcagggat 321
Query: 301 gaagtttccaaatacatgattgaaggagacttgcgacggttcaacgcgactaatataaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaagtttccaaatacatgattgaaggagacttgcgacggttcaacgcgactaatataaag 381
Query: 361 agattgaaggatatccagtgttacagaggcataaggcacattcaggggcttccttgcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agattgaaggatatccagtgttacagaggcataaggcacattcaggggcttccttgcaga 441
Query: 421 ggacagcgtactaagaacaattgcaggaccttgaagggtaagaaggttgccattgctggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggacagcgtactaagaacaattgcaggaccttgaagggtaagaaggttgccattgctggc 501
Query: 481 aagaagaagaagtaa 495
|||||||||||||||
Sbjct: 502 aagaagaagaagtaa 516