Miyakogusa Predicted Gene
- Lj1g3v0752220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0752220.1 tr|G7J463|G7J463_MEDTR Auxin response factor
OS=Medicago truncatula GN=MTR_3g073420 PE=4 SV=1,68.6,0,B3 DNA binding
domain,B3 DNA binding domain; FAMILY NOT NAMED,NULL; DNA-binding
pseudobarrel domain,,CUFF.26263.1
(1204 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72330 weakly similar to UniRef100_Q9AV47 Cluster: Aux... 652 0.0
>gnl|LJGI|TC72330 weakly similar to UniRef100_Q9AV47 Cluster: Auxin response factor 22;
n=1; Oryza sativa Japonica Group|Rep: Auxin response
factor 22 - Oryza sativa subsp. japonica (Rice), partial
(27%)
Length = 769
Score = 652 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 876 gctgtcgccgaagtcggttgcggaggcgatggagttggctgcacaggatatgccgttcga 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctgtcgccgaagtcggttgcggaggcgatggagttggctgcacaggatatgccgttcga 448
Query: 936 ggtggtgtattatccgaaggctgggtggtccgattttgtggtgaaggcggaggctgtgga 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggtggtgtattatccgaaggctgggtggtccgattttgtggtgaaggcggaggctgtgga 508
Query: 996 ggaagcgattcgtgttaggtggagccctgggatgagggtgaaaatggctgtggagactga 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggaagcgattcgtgttaggtggagccctgggatgagggtgaaaatggctgtggagactga 568
Query: 1056 tgattcgtccaggttgacctggtttcagggaatggtctcttcggtcagtttttctgataa 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgattcgtccaggttgacctggtttcagggaatggtctcttcggtcagtttttctgataa 628
Query: 1116 tgccccttggccacgctccccttggcgtatgcttcaggtattcttatgcttcatcatctc 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgccccttggccacgctccccttggcgtatgcttcaggtattcttatgcttcatcatctc 688
Query: 1176 tagttctctacggtttgcgttatgttaat 1204
|||||||||||||||||||||||||||||
Sbjct: 689 tagttctctacggtttgcgttatgttaat 717
Score = 615 bits (310), Expect = e-175
Identities = 310/310 (100%)
Strand = Plus / Plus
Query: 488 tgccgaggttctgcgctgattcaatcttcccggcgcttgactaccaggcggacccgccgg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccgaggttctgcgctgattcaatcttcccggcgcttgactaccaggcggacccgccgg 60
Query: 548 tgcagaatctgattatcactgatgttcacggcgtggcgtgggagtttcggcacatttacc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcagaatctgattatcactgatgttcacggcgtggcgtgggagtttcggcacatttacc 120
Query: 608 gcgggactccgaggcggcacctgcttactaccgggtggagcaagttcgttaacagcaaga 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgggactccgaggcggcacctgcttactaccgggtggagcaagttcgttaacagcaaga 180
Query: 668 agctcgtcgccggcgactctgtcgtgttcatgaagaaccccaggggggagatgtttgttg 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctcgtcgccggcgactctgtcgtgttcatgaagaaccccaggggggagatgtttgttg 240
Query: 728 gactccgccgcgcctctcggtttgccggcggcggcgacggggccaggcggagttttccga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gactccgccgcgcctctcggtttgccggcggcggcgacggggccaggcggagttttccga 300
Query: 788 tcggcgtggt 797
||||||||||
Sbjct: 301 tcggcgtggt 310