Miyakogusa Predicted Gene

Lj1g3v0715500.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0715500.2 Non Chatacterized Hit- tr|A5C5P2|A5C5P2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.5,9e-19,SUBFAMILY NOT NAMED,NULL; LUPUS LA
PROTEIN-RELATED,NULL; La,RNA-binding protein Lupus La; no
descrip,CUFF.26200.2
         (735 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV408729 similar to UniRef100_A7R117 Cluster: Chromosom...   250   1e-65

>gnl|LJGI|AV408729 similar to UniRef100_A7R117 Cluster: Chromosome chr4 scaffold_333,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_333, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 433

 Score =  250 bits (126), Expect = 1e-65
 Identities = 261/306 (85%)
 Strand = Plus / Plus

                                                                       
Query: 202 tttgtgcctccaataccacctaatgcaatgttctttcaacctccggatcctcaattgcac 261
           |||||||||||| | |||| | ||||||||||||||  |  | | || |||||  |||| 
Sbjct: 3   tttgtgcctccagttccacatcatgcaatgttctttgcaggttcagaccctcagctgcat 62

                                                                       
Query: 262 actatgattgtcaaccaagttgactactatttcagtaatgagaatttagttaaagatata 321
           |||| ||| || |||||  ||||||||||||| ||||||||||||||||||||||| | |
Sbjct: 63  actaagatagtaaaccagattgactactattttagtaatgagaatttagttaaagacaca 122

                                                                       
Query: 322 tacttgcggcagaacatggatgaccagggctttgttcccataaatttaatagcaggcttt 381
           | |||||||||||||||||||||||||||||  ||||| ||||| ||||| |||||||| 
Sbjct: 123 ttcttgcggcagaacatggatgaccagggctgggttccaataaaattaattgcaggcttc 182

                                                                       
Query: 382 aagaaagtaaagcttttgactgacaatatccagattgtactagatgctgttcgaagttca 441
           |||||||| | || ||||||||||||||||||| || || | |||||||||| || ||||
Sbjct: 183 aagaaagttatgcatttgactgacaatatccagcttatattggatgctgttcaaacttca 242

                                                                       
Query: 442 tctgctgttgaagtgcagggtgacaaaataaggagacggaatgattggaggagatggctg 501
           | || ||||||||||||||||||||| ||||||||||| |||||||||| ||||||| | 
Sbjct: 243 tatgttgttgaagtgcagggtgacaagataaggagacgaaatgattggatgagatggatc 302

                 
Query: 502 atgcct 507
           ||||||
Sbjct: 303 atgcct 308