Miyakogusa Predicted Gene
- Lj1g3v0672680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0672680.1 Non Chatacterized Hit- tr|I3T354|I3T354_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.88,0,L30e-like,NULL; NUCLEARHMG,H/ACA ribonucleoprotein
complex, subunit Nhp2, eukaryote; L7ARS6FAMILY,Ri,CUFF.26161.1
(387 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60624 homologue to UniRef100_A7PF22 Cluster: Chromoso... 767 0.0
gnl|LJGI|TC72652 homologue to UniRef100_A7PF22 Cluster: Chromoso... 513 e-145
gnl|LJGI|TC65763 homologue to UniRef100_A7PF22 Cluster: Chromoso... 513 e-145
gnl|LJGI|BP079094 homologue to UniRef100_A7PF22 Cluster: Chromos... 319 7e-87
gnl|LJGI|BP038569 homologue to UniRef100_A7PF22 Cluster: Chromos... 268 2e-71
gnl|LJGI|BW597781 homologue to UniRef100_A7PF22 Cluster: Chromos... 176 7e-44
>gnl|LJGI|TC60624 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (88%)
Length = 758
Score = 767 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 1 atgacaggagagacagtcaaccctaaagcttaccctttggctgatgcgcagctcacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atgacaggagagacagtcaaccctaaagcttaccctttggctgatgcgcagctcacaata 138
Query: 61 acgattatggatctcgttcaacaagcttccaactacaaacagctcaaaaaaggtgctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 acgattatggatctcgttcaacaagcttccaactacaaacagctcaaaaaaggtgctaat 198
Query: 121 gaagcaaccaagacattgaatagaggcatttctgagttcgttgtgatggcagcagacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaagcaaccaagacattgaatagaggcatttctgagttcgttgtgatggcagcagacact 258
Query: 181 gagccccttgagattcttctccatcttcctctacttgctgaggataagaatgttccgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagccccttgagattcttctccatcttcctctacttgctgaggataagaatgttccgtat 318
Query: 241 gtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtcacccgaccagtgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtcacccgaccagtgatt 378
Query: 301 gcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaatacagcaactaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaatacagcaactaaag 438
Query: 361 gatgctattgagaagctgttaatctga 387
|||||||||||||||||||||||||||
Sbjct: 439 gatgctattgagaagctgttaatctga 465
>gnl|LJGI|TC72652 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (88%)
Length = 647
Score = 513 bits (259), Expect = e-145
Identities = 355/387 (91%)
Strand = Plus / Plus
Query: 1 atgacaggagagacagtcaaccctaaagcttaccctttggctgatgcgcagctcacaata 60
||||| ||||| ||||| ||||| |||||||||||| |||||||||| |||||||| |||
Sbjct: 77 atgactggagaaacagtgaacccgaaagcttaccctctggctgatgctcagctcacgata 136
Query: 61 acgattatggatctcgttcaacaagcttccaactacaaacagctcaaaaaaggtgctaat 120
|| || |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 137 accatcatggatctcgttcaacaagcttccaactacaagcagctcaaaaagggtgccaat 196
Query: 121 gaagcaaccaagacattgaatagaggcatttctgagttcgttgtgatggcagcagacact 180
||||| |||||||||||||| ||||| ||||||||||||||||| ||||| || || ||
Sbjct: 197 gaagctaccaagacattgaacagaggaatttctgagttcgttgttatggccgcggatgct 256
Query: 181 gagccccttgagattcttctccatcttcctctacttgctgaggataagaatgttccgtat 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 257 gagcctcttgagattcttctccatcttcctctacttgctgaggataagaatgttccctat 316
Query: 241 gtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtcacccgaccagtgatt 300
|| || ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 317 gtgtttgtcccttcaaaacaagcacttgggcgagcatgtggggtaacccggccagtgatt 376
Query: 301 gcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaatacagcaactaaag 360
||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||
Sbjct: 377 gcatgttctgtgacaacaaatgagggaagccaattgaaatctcaaatacagcaactcaag 436
Query: 361 gatgctattgagaagctgttaatctga 387
|||||||||||||||||||||||||||
Sbjct: 437 gatgctattgagaagctgttaatctga 463
>gnl|LJGI|TC65763 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (88%)
Length = 932
Score = 513 bits (259), Expect = e-145
Identities = 355/387 (91%)
Strand = Plus / Plus
Query: 1 atgacaggagagacagtcaaccctaaagcttaccctttggctgatgcgcagctcacaata 60
||||| ||||| ||||| ||||| |||||||||||| |||||||||| |||||||| |||
Sbjct: 65 atgactggagaaacagtgaacccgaaagcttaccctctggctgatgctcagctcacgata 124
Query: 61 acgattatggatctcgttcaacaagcttccaactacaaacagctcaaaaaaggtgctaat 120
|| || |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 125 accatcatggatctcgttcaacaagcttccaactacaagcagctcaaaaagggtgccaat 184
Query: 121 gaagcaaccaagacattgaatagaggcatttctgagttcgttgtgatggcagcagacact 180
||||| |||||||||||||| ||||| ||||||||||||||||| ||||| || || ||
Sbjct: 185 gaagctaccaagacattgaacagaggaatttctgagttcgttgttatggccgcggatgct 244
Query: 181 gagccccttgagattcttctccatcttcctctacttgctgaggataagaatgttccgtat 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 245 gagcctcttgagattcttctccatcttcctctacttgctgaggataagaatgttccctat 304
Query: 241 gtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtcacccgaccagtgatt 300
|| || ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 305 gtgtttgtcccttcaaaacaagcacttgggcgagcatgtggggtaacccggccagtgatt 364
Query: 301 gcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaatacagcaactaaag 360
||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||
Sbjct: 365 gcatgttctgtgacaacaaatgagggaagccaattgaaatctcaaatacagcaactcaag 424
Query: 361 gatgctattgagaagctgttaatctga 387
|||||||||||||||||||||||||||
Sbjct: 425 gatgctattgagaagctgttaatctga 451
>gnl|LJGI|BP079094 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 504
Score = 319 bits (161), Expect = 7e-87
Identities = 161/161 (100%)
Strand = Plus / Minus
Query: 227 agaatgttccgtatgtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agaatgttccgtatgtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtca 286
Query: 287 cccgaccagtgattgcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaa 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cccgaccagtgattgcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaa 226
Query: 347 tacagcaactaaaggatgctattgagaagctgttaatctga 387
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tacagcaactaaaggatgctattgagaagctgttaatctga 185
>gnl|LJGI|BP038569 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 542
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 227 agaatgttccgtatgtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agaatgttccgtatgtattcgtcccatcaaaacaagctcttgggcgagcatgtggggtca 401
Query: 287 cccgaccagtgattgcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaa 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cccgaccagtgattgcatgttctgtgacaactaatgagggtagtcaattgaaatctcaaa 341
Query: 347 tacagcaactaaagg 361
|||||||||||||||
Sbjct: 340 tacagcaactaaagg 326
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 359 aggatgctattgagaagctgttaatctga 387
|||||||||||||||||||||||||||||
Sbjct: 227 aggatgctattgagaagctgttaatctga 199
>gnl|LJGI|BW597781 homologue to UniRef100_A7PF22 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 471
Score = 176 bits (89), Expect = 7e-44
Identities = 128/141 (90%)
Strand = Plus / Plus
Query: 247 gtcccatcaaaacaagctcttgggcgagcatgtggggtcacccgaccagtgattgcatgt 306
||||| ||||||||||| || ||||||||||||||||| |||| |||||||||||||||
Sbjct: 327 gtcccttcaaaacaagcactggggcgagcatgtggggtaaccccgccagtgattgcatgt 386
Query: 307 tctgtgacaactaatgagggtagtcaattgaaatctcaaatacagcaactaaaggatgct 366
|||||||| |||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 387 aaagtgacaacaaatgagggaagccaattgaaatctcaaatacagcaactcaaggatgct 446
Query: 367 attgagaagctgttaatctga 387
|||||||||||||||||||||
Sbjct: 447 attgagaagctgttaatctga 467