Miyakogusa Predicted Gene

Lj1g3v0672120.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0672120.1 tr|H0DG90|H0DG90_9STAP Protein CrcB homolog
OS=Staphylococcus pettenkoferi VCU012 GN=crcB PE=3
SV=1,32.26,0.85,PROKAR_LIPOPROTEIN,NULL,CUFF.26129.1
         (263 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071622 weakly similar to UniRef100_A7QS03 Cluster: Ch...   361   1e-99

>gnl|LJGI|BP071622 weakly similar to UniRef100_A7QS03 Cluster: Chromosome undetermined
           scaffold_155, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_155,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 402

 Score =  361 bits (182), Expect = 1e-99
 Identities = 185/186 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctgaagtggattcttacttgttgggactgtcaatatctttactgttttattttcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 atgctgaagtggattcttacttgttgggactgtcaatatctttactgttttattttcttt 127

                                                                       
Query: 61  ttggcttttataactggttgtagtctcatgctgcactggttgtcaaggatgctgaaagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttggcttttataactggttgtagtctcatgctgcactggttgtcaaggatgctgaaagta 67

                                                                       
Query: 121 acctttgtgtattttatttctatattatatacccgtgatgcattgaagtccttcaaggaa 180
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  acctgtgtgtattttatttctatattatatacccgtgatgcattgaagtccttcaaggaa 7

                 
Query: 181 ctgaaa 186
           ||||||
Sbjct: 6   ctgaaa 1