Miyakogusa Predicted Gene
- Lj1g3v0662090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0662090.1 Non Chatacterized Hit- tr|I1JB37|I1JB37_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4802 PE=,69.5,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; PREDICTED:
HYPOTHETICAL PROTEIN,NULL;,CUFF.26128.1
(1617 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61255 similar to UniRef100_A7QJH1 Cluster: Chromosome... 1025 0.0
gnl|LJGI|FS316319 210 2e-53
gnl|LJGI|TC70664 weakly similar to UniRef100_Q9MQV2 Cluster: DNA... 84 3e-15
>gnl|LJGI|TC61255 similar to UniRef100_A7QJH1 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 878
Score = 1025 bits (517), Expect = 0.0
Identities = 527/529 (99%), Gaps = 1/529 (0%)
Strand = Plus / Plus
Query: 1089 agaaaaagcggaagctatactccaggagattgaaggagaaaacttgagagacaatctatg 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agaaaaagcggaagctatactccaggagattgaaggagaaaacttgagagacaatctatg 61
Query: 1149 ggtatgcccgactttgctccgcctttatgcaaacttgggaaaggctgatgaagtggagag 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtatgcccgactttgctccgcctttatgcaaacttgggaaaggctgatgaagtggagag 121
Query: 1209 aatctggaaggtcgtcgagtcgaagcctggaattgacgtctgccttgctgcagttgaagc 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatctggaaggtcgtcgagtcgaagcctggaattgacgtctgccttgctgcagttgaagc 181
Query: 1269 ttggggaaggttgcagaaaattgaagaagcagaagctatttttgagatgatggcaaataa 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttggggaaggttgcagaaaattgaagaagcagaagctatttttgagatgatggcaaataa 241
Query: 1329 atggaaactctcctcaaagaactactcggtgctcttgaaggtgtatgcaaatcataagat 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atggaaactctcctcaaagaactactcggtgctcttgaaggtgtatgcaaatcataagat 301
Query: 1389 gctaaagaagggtaaggatcttattcagcgaatgggagaaaatgggtgcaagataggccc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 302 gctaaagaagggtaaggatcttattcagcgaatgggagaaaatgggtgcaagatagg-cc 360
Query: 1449 attgacctgggattcgcttgtgaaactttatacccaagcaggggaagttgagaaggcaga 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgacctgggattcgcttgtgaaactttatacccaagcaggggaagttgagaaggcaga 420
Query: 1509 tgctgttctgcagaaagtaatggagcagagtcgaatgacgccgatgttcaatacttatat 1568
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 tgctgttctgcagaaagtaatggaacagagtcgaatgacgccgatgttcaatacttatat 480
Query: 1569 ggcggtcatggagcagtatgcaaagaggggtgatgtccataattcagaa 1617
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcggtcatggagcagtatgcaaagaggggtgatgtccataattcagaa 529
>gnl|LJGI|FS316319
Length = 106
Score = 210 bits (106), Expect = 2e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 56 gtgcttatcgggcttcttgtgctaaattaacgtcgccaaccacttatgtggaagatgagg 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcttatcgggcttcttgtgctaaattaacgtcgccaaccacttatgtggaagatgagg 60
Query: 116 ctggtatccttgagtctcatccaataagatatggtagatttctttc 161
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggtatccttgagtctcatccaataagatatggtagatttctttc 106
>gnl|LJGI|TC70664 weakly similar to UniRef100_Q9MQV2 Cluster: DNA-binding protein;
n=1; Triticum aestivum|Rep: DNA-binding protein -
Triticum aestivum (Wheat), partial (9%)
Length = 757
Score = 83.8 bits (42), Expect = 3e-15
Identities = 150/186 (80%)
Strand = Plus / Plus
Query: 481 gctctggaaaagtgggttgaaaaagggaaggaactaaacaggccagagatctcattggcc 540
|||||||| |||||||||||| ||||||| ||| | | ||| | ||||||||| ||||
Sbjct: 559 gctctggataagtgggttgaagaagggaaagaaatgagcagacaagagatctctcaggcc 618
Query: 541 tttgttaatcttcggaagcgtaaaatgtatgggagggctttgcagctcttacagtggcta 600
| || |||||| |||||||| ||||| ||||| ||||||||||||| | |||||||
Sbjct: 619 atatttcttcttcgcaagcgtaatatgtacgggagagctttgcagctctcagagtggctc 678
Query: 601 gagaaaaacaagaagcttgaatttgctgagaaagattatgcttctgtacttgatttaatt 660
||| ||| ||| || |||||||| ||| | |||||||||||| | |||||||||||
Sbjct: 679 gagtcaaaaaagcagattgaatttattgaaagggattatgcttctcgagttgatttaatt 738
Query: 661 gccaaa 666
||||||
Sbjct: 739 gccaaa 744