Miyakogusa Predicted Gene
- Lj1g3v0652040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0652040.1 tr|B9GUI6|B9GUI6_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_710171
PE=4,79.57,0,AMINOTRANSFERASE RELATED,Diaminopimelate
aminotransferase, DapL, plant/Chlamydia-type; SUBGROUP I
AM,CUFF.26117.1
(558 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69105 similar to UniRef100_A7NV37 Cluster: Chromosome... 1106 0.0
gnl|LJGI|TC73340 similar to UniRef100_A7Q6X8 Cluster: Chromosome... 167 9e-41
gnl|LJGI|TC78789 weakly similar to UniRef100_A7Q6X8 Cluster: Chr... 115 3e-25
gnl|LJGI|TC63353 similar to UniRef100_A7Q6X8 Cluster: Chromosome... 82 4e-15
gnl|LJGI|DC595516 similar to UniRef100_A7Q6X8 Cluster: Chromosom... 58 6e-08
>gnl|LJGI|TC69105 similar to UniRef100_A7NV37 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1418
Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 1 atgaagtgtggacctgagaataatttctttccagacttgtcaactactccaagggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atgaagtgtggacctgagaataatttctttccagacttgtcaactactccaagggttgat 662
Query: 61 gtgattttcttttgttctccaaacaatccaactggtagtgcagcatctaggcagcaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gtgattttcttttgttctccaaacaatccaactggtagtgcagcatctaggcagcaacta 722
Query: 121 aagcagcttgtggagtttgcaaaagcaaatggatctatgattatatatgactctgcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aagcagcttgtggagtttgcaaaagcaaatggatctatgattatatatgactctgcttac 782
Query: 181 tctgcttacatatcagatgaaagcccaagatcaatctatgaaattcctggagccagagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tctgcttacatatcagatgaaagcccaagatcaatctatgaaattcctggagccagagag 842
Query: 241 gtagcaattgaaatttcatcgttttccaaatttgctggttttactggtgtccgccttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gtagcaattgaaatttcatcgttttccaaatttgctggttttactggtgtccgccttggc 902
Query: 301 tggacggttgtccctgaagaactgcggtatgctaatggttattctgtactaaaggattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tggacggttgtccctgaagaactgcggtatgctaatggttattctgtactaaaggattat 962
Query: 361 gaccgcattgtgtgcacctccttcaatggtgcatcaaatattgttcaagctggtggactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 gaccgcattgtgtgcacctccttcaatggtgcatcaaatattgttcaagctggtggactt 1022
Query: 421 gcttgcctttctcctgaaggatttaaggcactaaaatctaccatcaaccactacatggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 gcttgcctttctcctgaaggatttaaggcactaaaatctaccatcaaccactacatggaa 1082
Query: 481 aatgccaaaatattggttgacacgtttgagtcacttggtctgaaggtgtatggtggcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 aatgccaaaatattggttgacacgtttgagtcacttggtctgaaggtgtatggtggcaga 1142
Query: 541 aatgccccctatatatgg 558
||||||||||||||||||
Sbjct: 1143 aatgccccctatatatgg 1160
>gnl|LJGI|TC73340 similar to UniRef100_A7Q6X8 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 781
Score = 167 bits (84), Expect = 9e-41
Identities = 216/260 (83%)
Strand = Plus / Plus
Query: 64 attttcttttgttctccaaacaatccaactggtagtgcagcatctaggcagcaactaaag 123
|||||||||||||||||||||||||| |||||| ||| ||| | ||| |||||||| ||
Sbjct: 257 attttcttttgttctccaaacaatcccactggtcatgcggcaacaaggaagcaactagag 316
Query: 124 cagcttgtggagtttgcaaaagcaaatggatctatgattatatatgactctgcttactct 183
|| |||||||| ||||| |||| |||||||| || ||||| | ||||||||| || |||
Sbjct: 317 caacttgtggattttgccaaagagaatggatcaatcattatctttgactctgcatattct 376
Query: 184 gcttacatatcagatgaaagcccaagatcaatctatgaaattcctggagccagagaggta 243
|| || || ||||||| || || | |||||||| ||||||| ||||||||||||||||
Sbjct: 377 gcctatatcacagatgatagtcctaaatcaatctttgaaatttctggagccagagaggtt 436
Query: 244 gcaattgaaatttcatcgttttccaaatttgctggttttactggtgtccgccttggctgg 303
||||||||| | || || || || ||||||||||| || || || || |||||||| |||
Sbjct: 437 gcaattgaagtctcgtccttctcaaaatttgctggcttcacaggcgtacgccttggttgg 496
Query: 304 acggttgtccctgaagaact 323
|| || ||||||||||||||
Sbjct: 497 actgtggtccctgaagaact 516
>gnl|LJGI|TC78789 weakly similar to UniRef100_A7Q6X8 Cluster: Chromosome chr12
scaffold_57, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 779
Score = 115 bits (58), Expect = 3e-25
Identities = 145/174 (83%)
Strand = Plus / Plus
Query: 64 attttcttttgttctccaaacaatccaactggtagtgcagcatctaggcagcaactaaag 123
|||||||||||||||||||||||||| |||||| ||| ||| | ||| |||||||| ||
Sbjct: 606 attttcttttgttctccaaacaatcccactggtcatgcggcaacaaggaagcaactagag 665
Query: 124 cagcttgtggagtttgcaaaagcaaatggatctatgattatatatgactctgcttactct 183
|| |||||||| ||||| |||| |||||||| || ||||| | ||||||||| || |||
Sbjct: 666 caacttgtggattttgccaaagagaatggatcaatcattatctttgactctgcatattct 725
Query: 184 gcttacatatcagatgaaagcccaagatcaatctatgaaattcctggagccaga 237
|| || || ||||||| || || | |||||||| ||||||| |||||||||||
Sbjct: 726 gcctatatcacagatgatagtcctaaatcaatctttgaaatttctggagccaga 779
>gnl|LJGI|TC63353 similar to UniRef100_A7Q6X8 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 763
Score = 81.8 bits (41), Expect = 4e-15
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 219 tgaaattcctggagccagagaggtagcaattgaaatttcatcgttttccaaatttgctgg 278
||||||| |||||||||||||||| ||||||||| | || || || || |||||||||||
Sbjct: 7 tgaaatttctggagccagagaggttgcaattgaagtctcgtccttctcaaaatttgctgg 66
Query: 279 ttttactggtgtccgccttggctggacggttgtccctgaagaact 323
|| || || || |||||||| ||||| || ||||||||||||||
Sbjct: 67 cttcacaggcgtacgccttggttggactgtggtccctgaagaact 111
>gnl|LJGI|DC595516 similar to UniRef100_A7Q6X8 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 581
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 64 attttcttttgttctccaaacaatccaactggt 96
|||||||||||||||||||||||||| ||||||
Sbjct: 524 attttcttttgttctccaaacaatcccactggt 556