Miyakogusa Predicted Gene

Lj1g3v0652020.4
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0652020.4 Non Chatacterized Hit- tr|Q9M112|Q9M112_ARATH
Putative GTP pyrophosphokinase (Fragment)
OS=Arabidops,100,0.005,seg,NULL,CUFF.26122.4
         (261 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75776 homologue to UniRef100_Q3EAC8 Cluster: Uncharac...   478   e-135
gnl|LJGI|GO025213 homologue to UniRef100_Q84LE7 Cluster: RelA-Sp...   295   7e-80
gnl|LJGI|BW595193 homologue to UniRef100_Q84LE7 Cluster: RelA-Sp...    82   2e-15

>gnl|LJGI|TC75776 homologue to UniRef100_Q3EAC8 Cluster: Uncharacterized protein
           At4g02260.3; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At4g02260.3 - Arabidopsis
           thaliana (Mouse-ear cress), partial (3%)
          Length = 1191

 Score =  478 bits (241), Expect = e-135
 Identities = 256/261 (98%), Gaps = 5/261 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttagacttgaagtccagattagaacagaagaaatggacttgatagccgaaagggga 60
           ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||
Sbjct: 374 atgtttagacttgaagtccaga-----acagaagaaatggacttgatagccgaaagggga 428

                                                                       
Query: 61  ttccagctgaggttgcatcatttgtttgtaagaatgggaaagctacatggatctcaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttccagctgaggttgcatcatttgtttgtaagaatgggaaagctacatggatctcaattg 488

                                                                       
Query: 121 gtccatctggaaaaaagacagtttcagatacttgcacctgaaaaacccaagaaagtggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtccatctggaaaaaagacagtttcagatacttgcacctgaaaaacccaagaaagtggta 548

                                                                       
Query: 181 aaacgtttagaacatgttcatatgttcgtgaggggatcaggtggaagtagaccgagtagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaacgtttagaacatgttcatatgttcgtgaggggatcaggtggaagtagaccgagtagt 608

                                
Query: 241 agagctgtctcaatttaagac 261
           |||||||||||||||||||||
Sbjct: 609 agagctgtctcaatttaagac 629


>gnl|LJGI|GO025213 homologue to UniRef100_Q84LE7 Cluster: RelA-SpoT like protein RSH1;
           n=1; Nicotiana tabacum|Rep: RelA-SpoT like protein RSH1
           - Nicotiana tabacum (Common tobacco), partial (3%)
          Length = 645

 Score =  295 bits (149), Expect = 7e-80
 Identities = 156/157 (99%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  gggattccagctgaggttgcatcatttgtttgtaagaatgggaaagctacatggatctca 116
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 457 gggattccagctgaggttgcatcatttgtttgtaagaatgggaa-gctacatggatctca 515

                                                                       
Query: 117 attggtccatctggaaaaaagacagtttcagatacttgcacctgaaaaacccaagaaagt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 attggtccatctggaaaaaagacagtttcagatacttgcacctgaaaaacccaagaaagt 575

                                                
Query: 177 ggtaaaacgtttagaacatgttcatatgttcgtgagg 213
           |||||||||||||||||||||||||||||||||||||
Sbjct: 576 ggtaaaacgtttagaacatgttcatatgttcgtgagg 612



 Score =  113 bits (57), Expect = 5e-25
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                    
Query: 1   atgtttagacttgaagtccagattagaacagaagaaatggacttgatagccgaaagg 57
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atgtttagacttgaagtccagattagaacagaagaaatggacttgatagccgaaagg 356


>gnl|LJGI|BW595193 homologue to UniRef100_Q84LE7 Cluster: RelA-SpoT like protein RSH1;
           n=1; Nicotiana tabacum|Rep: RelA-SpoT like protein RSH1
           - Nicotiana tabacum (Common tobacco), partial (3%)
          Length = 485

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 17  tccagattagaacagaagaaatggacttgatagccgaaagg 57
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tccagattagaacagaagaaatggacttgatagccgaaagg 335