Miyakogusa Predicted Gene

Lj1g3v0579730.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0579730.1 Non Chatacterized Hit- tr|I1KD47|I1KD47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48938
PE,72.83,0,seg,NULL; PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no
descript,NODE_47370_length_3325_cov_19.939850.path1.1
         (2880 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO028489 similar to UniRef100_A7P9I6 Cluster: Chromosom...    62   2e-08

>gnl|LJGI|GO028489 similar to UniRef100_A7P9I6 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (26%)
          Length = 924

 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                        
Query: 2743 aatctacgtatttgtgtagactgtcacaatgccattaaattagtatcaagggttgttgga 2802
            ||||||||||| |||| |||||| |||||||| || ||| |  | || | | ||||||| 
Sbjct: 324  aatctacgtatatgtggagactgccacaatgctatcaaaattatgtcgaagattgttggg 265

                                                               
Query: 2803 agggagattattgtaagggacaacaagcgctttcatcatttcaaaaatgga 2853
            |||||| | ||||| ||||| |||||||| || |||||||||||| |||||
Sbjct: 264  agggagctcattgtgagggataacaagcgattccatcatttcaaagatgga 214