Miyakogusa Predicted Gene
- Lj1g3v0579590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0579590.1 tr|G7IT24|G7IT24_MEDTR ATP synthase subunit a
chloroplastic OS=Medicago truncatula GN=MTR_2g059350
P,86.38,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
O-FucT,GDP-fucose protein O-fucosyltransferase; seg,CUFF.25985.1
(1545 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67991 similar to UniRef100_A7PGG5 Cluster: Chromosome... 928 0.0
gnl|LJGI|TC68300 homologue to UniRef100_A7PGG5 Cluster: Chromoso... 618 e-176
gnl|LJGI|TC77435 similar to UniRef100_A7PGG5 Cluster: Chromosome... 406 e-112
>gnl|LJGI|TC67991 similar to UniRef100_A7PGG5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 1039
Score = 928 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1078 gaaatatatggtggggaccggagaatggccagtcttgtgaagaactatccaaatttggtc 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaatatatggtggggaccggagaatggccagtcttgtgaagaactatccaaatttggtc 60
Query: 1138 agaaaagaaacgctgttggaaccttctgaccttcagttcttccaaaatcattcctcccag 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaagaaacgctgttggaaccttctgaccttcagttcttccaaaatcattcctcccag 120
Query: 1198 atggcagcattggattatcttgtctcattagagagtgatatctttgtccctacatatgat 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggcagcattggattatcttgtctcattagagagtgatatctttgtccctacatatgat 180
Query: 1258 ggcaatatggccaaagtagttgagggccatcgcagatatcttggcttcaagaagacaatt 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcaatatggccaaagtagttgagggccatcgcagatatcttggcttcaagaagacaatt 240
Query: 1318 ttattgaacagaaaggtcctagttgatttgatagaccaatacaattacggggtattgaac 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttattgaacagaaaggtcctagttgatttgatagaccaatacaattacggggtattgaac 300
Query: 1378 tgggatgaattctcttcagctgtgaaggaagctcatgctgatcgcatgggtaacccaact 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggatgaattctcttcagctgtgaaggaagctcatgctgatcgcatgggtaacccaact 360
Query: 1438 aaaagatcagtaatcccagacaggccgaaagaagaggattatttctatgccaatccagag 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaagatcagtaatcccagacaggccgaaagaagaggattatttctatgccaatccagag 420
Query: 1498 gagtgtttaggactatcagatgatctgttgagtagtgcagagtaatgt 1545
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagtgtttaggactatcagatgatctgttgagtagtgcagagtaatgt 468
>gnl|LJGI|TC68300 homologue to UniRef100_A7PGG5 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 661
Score = 618 bits (312), Expect = e-176
Identities = 315/316 (99%)
Strand = Plus / Plus
Query: 1 atgaagagagggaaggtggtttgggaagggttgatgatgatgggtttgaagggggagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atgaagagagggaaggtggtttgggaagggttgatgatgatgggtttgaagggggagagt 405
Query: 61 aacaacaacagcagcaaggttgagaagctcaagaacacggtggtgtcggtgtcgtcgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacaacaacagcagcaaggttgagaagctcaagaacacggtggtgtcggtgtcgtcgaag 465
Query: 121 tcgtcaaggatgaagctgtggatcatacgcgccaccacatcggtgttactgtggacctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcgtcaaggatgaagctgtggatcatacgcgccaccacatcggtgttactgtggacctgc 525
Query: 181 atcgttcagttaactgctttgggtgacatgtgggggccgagagttttgaaaggatggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atcgttcagttaactgctttgggtgacatgtgggggccgagagttttgaaaggatggcct 585
Query: 241 tcttgtttcaaccatgaaaccgaatccgcactcctcgagttgccttctgtgcgccccaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 586 tcttgtttcaaccatgaaaccgaatccgcactcctcgagttgccttctgtgcgccccaaa 645
Query: 301 gttctaccacctaaga 316
||||||||||||||||
Sbjct: 646 gttctaccacctaaga 661
>gnl|LJGI|TC77435 similar to UniRef100_A7PGG5 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 980
Score = 406 bits (205), Expect = e-112
Identities = 379/437 (86%)
Strand = Plus / Plus
Query: 1097 ggagaatggccagtcttgtgaagaactatccaaatttggtcagaaaagaaacgctgttgg 1156
|||||| ||| |||||| ||||| | || || || ||||| || || ||||| |||||||
Sbjct: 1 ggagaacggcaagtcttttgaaggagtacccgaaattggttaggaaggaaacactgttgg 60
Query: 1157 aaccttctgaccttcagttcttccaaaatcattcctcccagatggcagcattggattatc 1216
| || |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 61 agccatctgaccttcagttcttccagaatcattcatctcagatggcagcattggattatc 120
Query: 1217 ttgtctcattagagagtgatatctttgtccctacatatgatggcaatatggccaaagtag 1276
||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 121 ttgtctcattagaaagcgatatttttgtccctacgtatgatggaaatatggcaaaagtag 180
Query: 1277 ttgagggccatcgcagatatcttggcttcaagaagacaattttattgaacagaaaggtcc 1336
|||||||||||||||||||||| || ||||||| ||||||||||||||||||| | |||
Sbjct: 181 ttgagggccatcgcagatatctcgggttcaagagaacaattttattgaacagaaggctcc 240
Query: 1337 tagttgatttgatagaccaatacaattacggggtattgaactgggatgaattctcttcag 1396
|||||||||||||||| || ||||| | || ||| ||||||||||||||||||||||||
Sbjct: 241 tagttgatttgatagatcagtacaacaatggagtactgaactgggatgaattctcttcag 300
Query: 1397 ctgtgaaggaagctcatgctgatcgcatgggtaacccaactaaaagatcagtaatcccag 1456
| ||||||||| ||||||||||||||||||| | ||||| |||||| | | ||||| |
Sbjct: 301 ccgtgaaggaatctcatgctgatcgcatgggcagcccaagtaaaaggttggcaatccttg 360
Query: 1457 acaggccgaaagaagaggattatttctatgccaatccagaggagtgtttaggactatcag 1516
||| || |||||||||||||||||||| ||||||||| | |||||||||| || ||||
Sbjct: 361 acaaaccaaaagaagaggattatttctacgccaatccacacgagtgtttagaaccatcaa 420
Query: 1517 atgatctgttgagtagt 1533
|||||| ||| ||||||
Sbjct: 421 atgatccgttcagtagt 437