Miyakogusa Predicted Gene

Lj1g3v0558030.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0558030.1 Non Chatacterized Hit- tr|E1ZEZ5|E1ZEZ5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,48.41,2e-19,seg,NULL; DUF1118,Protein of unknown function
DUF1118,CUFF.25962.1
         (525 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62920 similar to UniRef100_Q8VYV1 Cluster: AT5g08050/...  1041   0.0  

>gnl|LJGI|TC62920 similar to UniRef100_Q8VYV1 Cluster: AT5g08050/F13G24_250; n=1;
           Arabidopsis thaliana|Rep: AT5g08050/F13G24_250 -
           Arabidopsis thaliana (Mouse-ear cress), partial (74%)
          Length = 1330

 Score = 1041 bits (525), Expect = 0.0
 Identities = 525/525 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggtttcagcatcaaccatttgcagaggatccccatttatgtgctatgctcctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atggaggtttcagcatcaaccatttgcagaggatccccatttatgtgctatgctcctgct 147

                                                                       
Query: 61  acaacaaaaaattctgctactttctcaccttttcttgtcaaatccatggctactccgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 acaacaaaaaattctgctactttctcaccttttcttgtcaaatccatggctactccgaag 207

                                                                       
Query: 121 ccccctccttcagtgactaaaaagaattcaggtacagcccccataaaacttctcacaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccccctccttcagtgactaaaaagaattcaggtacagcccccataaaacttctcacaaga 267

                                                                       
Query: 181 atggagcagctgaaactgctgagcaaagcagagaaagcagggctgttatccgcagcggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atggagcagctgaaactgctgagcaaagcagagaaagcagggctgttatccgcagcggag 327

                                                                       
Query: 241 aagtccggactctccctctcaacaatagagaaactgggactcctctcaaaagcagaagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagtccggactctccctctcaacaatagagaaactgggactcctctcaaaagcagaagag 387

                                                                       
Query: 301 ctgggtgtgttatccgccgctactgatcccggaactccgggatcactcttaaccctcagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctgggtgtgttatccgccgctactgatcccggaactccgggatcactcttaaccctcagc 447

                                                                       
Query: 361 ttgggcttgctcctcctgggacccttgtttgtttacctggtgcctgaggataacctcggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttgggcttgctcctcctgggacccttgtttgtttacctggtgcctgaggataacctcggc 507

                                                                       
Query: 421 gaggtgggattgcaagttgtagttgccttgctctctgtagttggtggttctgctggtttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaggtgggattgcaagttgtagttgccttgctctctgtagttggtggttctgctggtttt 567

                                                        
Query: 481 gctgcatcaagttttgtatccaacctgcagaaatcaaattaaatt 525
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gctgcatcaagttttgtatccaacctgcagaaatcaaattaaatt 612