Miyakogusa Predicted Gene

Lj1g3v0526680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0526680.1 Non Chatacterized Hit- tr|F6H333|F6H333_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.82,7e-19,Formin homology 2 domain (FH2 domain),Actin-binding
FH2; FH2,Actin-binding FH2; coiled-coil,NULL; FO,CUFF.25959.1
         (1089 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338018 similar to UniRef100_A7PDI0 Cluster: Chromosom...   737   0.0  

>gnl|LJGI|FS338018 similar to UniRef100_A7PDI0 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 794

 Score =  737 bits (372), Expect = 0.0
 Identities = 375/376 (99%)
 Strand = Plus / Plus

                                                                       
Query: 399 tttggagctgatgaaagtgcctcgagtggaatcaaaattaagagtttttgctttcaagat 458
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttggagccgatgaaagtgcctcgagtggaatcaaaattaagagtttttgctttcaagat 60

                                                                       
Query: 459 tcagtacggttgtcagattacagagtttaagaggagtttaaacacggtgaactctgcctg 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcagtacggttgtcagattacagagtttaagaggagtttaaacacggtgaactctgcctg 120

                                                                       
Query: 519 tgaagaggtccgcaattcgctaaaactgaaggagattatgaagaaaattctttatttggg 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagaggtccgcaattcgctaaaactgaaggagattatgaagaaaattctttatttggg 180

                                                                       
Query: 579 taatacattaaatcaaggaacagcaaggggatctgctgttggattcaagttggaaagtct 638
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatacattaaatcaaggaacagcaaggggatctgctgttggattcaagttggaaagtct 240

                                                                       
Query: 639 tttaaagctcactgatactcgtgcttctaacagtagaatgacactgatgcattatctttg 698
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaaagctcactgatactcgtgcttctaacagtagaatgacactgatgcattatctttg 300

                                                                       
Query: 699 caaggtcctagccgaaaagtctcctggactccttgattttcacctgggccttgttagctt 758
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaggtcctagccgaaaagtctcctggactccttgattttcacctgggccttgttagctt 360

                           
Query: 759 ggaaacagccactaag 774
           ||||||||||||||||
Sbjct: 361 ggaaacagccactaag 376