Miyakogusa Predicted Gene
- Lj1g3v0525430.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0525430.2 Non Chatacterized Hit- tr|I1KCV4|I1KCV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39529 PE,82.81,0,SNARE
PROTEIN, PUTATIVE,NULL; VESICLE TRANSPORT V-SNARE PROTEIN
VTI1-RELATED,NULL; V-SNARE,Vesicle t,CUFF.25943.2
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75290 similar to UniRef100_A7PDI5 Cluster: Chromosome... 698 0.0
gnl|LJGI|TC65213 similar to UniRef100_A2Q3R8 Cluster: Vesicle tr... 90 2e-17
gnl|LJGI|TC69725 similar to UniRef100_A7PDI5 Cluster: Chromosome... 60 2e-08
gnl|LJGI|BP051450 similar to UniRef100_A2Q3R8 Cluster: Vesicle t... 54 1e-06
>gnl|LJGI|TC75290 similar to UniRef100_A7PDI5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 450
Score = 698 bits (352), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus
Query: 1 atgagtgaggtatttgaagggtacgagcgtcaatactgtgagctatccgccaatcttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgagtgaggtatttgaagggtacgagcgtcaatactgtgagctatccgccaatcttacc 158
Query: 61 cgccaatgcactgcagcttctgctcttgatggagaacagaagaagcagaaactttctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cgccaatgcactgcagcttctgctcttgatggagaacagaagaagcagaaactttctgaa 218
Query: 121 ataaaagctgggttagacgatgctgatgcattggttcggaaaatggaccttgaggctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ataaaagctgggttagacgatgctgatgcattggttcggaaaatggaccttgaggctagg 278
Query: 181 agtttgcagccaagtatgaaagcaacacttcttgtcaagttaagggactataaaaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agtttgcagccaagtatgaaagcaacacttcttgtcaagttaagggactataaaaatgat 338
Query: 241 ttgaccagtttgaaaaatgacattaaaagaatctcatcagctaatgtcagcctcactgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttgaccagtttgaaaaatgacattaaaagaatctcatcagctaatgtcagcctcactgct 398
Query: 301 cgagatgagttgttggagtcaggaagagctgattcgctggcggtatcaaatg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cgagatgagttgttggagtcaggaagagctgattcgctggcggtatcaaatg 450
>gnl|LJGI|TC65213 similar to UniRef100_A2Q3R8 Cluster: Vesicle transport v-SNARE;
t-snare; n=1; Medicago truncatula|Rep: Vesicle transport
v-SNARE; t-snare - Medicago truncatula (Barrel medic),
complete
Length = 1137
Score = 89.7 bits (45), Expect = 2e-17
Identities = 117/141 (82%)
Strand = Plus / Plus
Query: 418 agcagaaaaacaatgctggagacagaggagcttggtgtctctatcctccaagatttgcat 477
||||| ||||||||| |||| ||||| ||||| ||||| || || || ||||||||||||
Sbjct: 577 agcaggaaaacaatgttggaaacagaagagctcggtgtttcgattcttcaagatttgcat 636
Query: 478 caacaacgtcaatctctactccatgcccatacgacgctccatggagtggatgataacatt 537
||| || |||||||| | ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 637 tcacagcgacaatctctgttgcatgctcatacaacgcttcatggagtagatgataacata 696
Query: 538 agcaggagcaagaagattttg 558
||| ||||||||| ||||||
Sbjct: 697 ggcaagagcaagaaaattttg 717
Score = 81.8 bits (41), Expect = 5e-15
Identities = 107/129 (82%)
Strand = Plus / Plus
Query: 65 aatgcactgcagcttctgctcttgatggagaacagaagaagcagaaactttctgaaataa 124
|||||||||||||| | ||||| ||||||| || |||||||| ||| ||||||||||||
Sbjct: 224 aatgcactgcagctggttctcttaatggagagcaaaagaagcaaaaagtttctgaaataa 283
Query: 125 aagctgggttagacgatgctgatgcattggttcggaaaatggaccttgaggctaggagtt 184
| ||||| | || || || || || ||| |||| |||||||| |||||||| || ||||
Sbjct: 284 aggctggaattgatgaagcagaagctttgattcgcaaaatggatcttgaggcaagaagtt 343
Query: 185 tgcagccaa 193
|||||||||
Sbjct: 344 tgcagccaa 352
>gnl|LJGI|TC69725 similar to UniRef100_A7PDI5 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1106
Score = 60.0 bits (30), Expect = 2e-08
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 94 gaacagaagaagcagaaactttctgaaataaaagctgggttagacgatgctgatgcattg 153
||||||||| | || || |||||||| || |||||||| |||| ||||| |||| ||
Sbjct: 174 gaacagaagcaacaaaagctttctgagatcaaagctggactagatgatgccgatgttctg 233
Query: 154 gttcggaaaatggaccttgaggctaggagtttgcagccaagtatgaaagcaacacttctt 213
||||||| |||||||| ||||| || ||||||||||| ||| | ||||||| ||||||
Sbjct: 234 attcggaagatggacctcgaggcgagaagtttgcagccgagtgtaaaagcaatgcttctt 293
Query: 214 gtcaagttaaggga 227
| ||||| |||||
Sbjct: 294 gcaaagttgaggga 307
>gnl|LJGI|BP051450 similar to UniRef100_A2Q3R8 Cluster: Vesicle transport v-SNARE;
t-snare; n=1; Medicago truncatula|Rep: Vesicle transport
v-SNARE; t-snare - Medicago truncatula (Barrel medic),
partial (24%)
Length = 445
Score = 54.0 bits (27), Expect = 1e-06
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 511 acgctccatggagtggatgataacattagcaggagcaagaagattttgtcagccatgtcc 570
||||| |||||||||||| ||||||| | | ||||||||| |||||||| ||||||
Sbjct: 435 acgcttcatggagtggataataacatagggaagagcaagaaaattttgtccaacatgtca 376
Query: 571 agaagaatgagcaggaacaaatggatt 597
||||| |||| || |||||| ||||||
Sbjct: 375 agaaggatgaacaagaacaagtggatt 349