Miyakogusa Predicted Gene
- Lj1g3v0524400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0524400.1 tr|G7J8V5|G7J8V5_MEDTR 50S ribosomal protein L13
OS=Medicago truncatula GN=MTR_3g082760 PE=4
SV=1,75,0.00000001,rplM_bact: ribosomal protein L13,Ribosomal protein
L13, bacterial-type; RIBOSOMAL_L13,Ribosomal prot,CUFF.25940.1
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67861 similar to UniRef100_A7PLS6 Cluster: Chromosome... 1096 0.0
gnl|LJGI|BP038806 similar to UniRef100_A7PLS6 Cluster: Chromosom... 575 e-163
>gnl|LJGI|TC67861 similar to UniRef100_A7PLS6 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1038
Score = 1096 bits (553), Expect = 0.0
Identities = 600/621 (96%), Gaps = 21/621 (3%)
Strand = Plus / Plus
Query: 1 atgaagatgctaacatctttcaacatgaagaaagccgctgctgggcttcgacgcatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgaagatgctaacatctttcaacatgaagaaagccgctgctgggcttcgacgcatcaat 251
Query: 61 ctcgacggtctccgctggcgggttttcgatgccaagggccaggttcttggtaggttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcgacggtctccgctggcgggttttcgatgccaagggccaggttcttggtaggttagca 311
Query: 121 tctcaaatagctactgtagtccaaggaaaggacaagccaacttatgctcctaatcgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tctcaaatagctactgtagtccaaggaaaggacaagccaacttatgctcctaatcgtgat 371
Query: 181 gatggagatatgtgcattgtgcttaatgcaaaggatgtttgtgtgactgggagaaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatggagatatgtgcattgtgcttaatgcaaaggatgtttgtgtgactgggagaaaattt 431
Query: 241 aaagacaaggtctactactggcatacagggtatgtggggggcctcaagcaaaggactctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaagacaaggtctactactggcatacagggtatgtggggggcctcaagcaaaggactctg 491
Query: 301 aaggaacagatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaggaacagatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctg 551
Query: 361 ccaagaaacaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccaagaaacaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgag 611
Query: 421 caccctttcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 caccctttcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaa 671
Query: 481 atgcggccacgagcaaggcgtgccatgattcgagcacaga-------------------- 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atgcggccacgagcaaggcgtgccatgattcgagcacagaagaaggctgagctgcaacaa 731
Query: 521 -agaaggctgaacagcaacagcagaaggctgatggaacaaagggcgaaaagagtgaagca 579
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cagaaggctgaacagcaacagcagaaggctgatggaacaaagggcgaaaagagtgaagca 791
Query: 580 cagggagagagtgcatgaaga 600
|||||||||||||||||||||
Sbjct: 792 cagggagagagtgcatgaaga 812
>gnl|LJGI|BP038806 similar to UniRef100_A7PLS6 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 523
Score = 575 bits (290), Expect = e-163
Identities = 292/293 (99%)
Strand = Plus / Minus
Query: 308 agatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctgccaagaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctgccaagaa 464
Query: 368 acaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgagcaccctt 427
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acnaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgagcaccctt 404
Query: 428 tcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaaatgcggc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaaatgcggc 344
Query: 488 cacgagcaaggcgtgccatgattcgagcacagaagaaggctgaacagcaacagcagaagg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cacgagcaaggcgtgccatgattcgagcacagaagaaggctgaacagcaacagcagaagg 284
Query: 548 ctgatggaacaaagggcgaaaagagtgaagcacagggagagagtgcatgaaga 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgatggaacaaagggcgaaaagagtgaagcacagggagagagtgcatgaaga 231