Miyakogusa Predicted Gene

Lj1g3v0524400.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0524400.1 tr|G7J8V5|G7J8V5_MEDTR 50S ribosomal protein L13
OS=Medicago truncatula GN=MTR_3g082760 PE=4
SV=1,75,0.00000001,rplM_bact: ribosomal protein L13,Ribosomal protein
L13, bacterial-type; RIBOSOMAL_L13,Ribosomal prot,CUFF.25940.1
         (600 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67861 similar to UniRef100_A7PLS6 Cluster: Chromosome...  1096   0.0  
gnl|LJGI|BP038806 similar to UniRef100_A7PLS6 Cluster: Chromosom...   575   e-163

>gnl|LJGI|TC67861 similar to UniRef100_A7PLS6 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 1038

 Score = 1096 bits (553), Expect = 0.0
 Identities = 600/621 (96%), Gaps = 21/621 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagatgctaacatctttcaacatgaagaaagccgctgctgggcttcgacgcatcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgaagatgctaacatctttcaacatgaagaaagccgctgctgggcttcgacgcatcaat 251

                                                                       
Query: 61  ctcgacggtctccgctggcgggttttcgatgccaagggccaggttcttggtaggttagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcgacggtctccgctggcgggttttcgatgccaagggccaggttcttggtaggttagca 311

                                                                       
Query: 121 tctcaaatagctactgtagtccaaggaaaggacaagccaacttatgctcctaatcgtgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tctcaaatagctactgtagtccaaggaaaggacaagccaacttatgctcctaatcgtgat 371

                                                                       
Query: 181 gatggagatatgtgcattgtgcttaatgcaaaggatgtttgtgtgactgggagaaaattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatggagatatgtgcattgtgcttaatgcaaaggatgtttgtgtgactgggagaaaattt 431

                                                                       
Query: 241 aaagacaaggtctactactggcatacagggtatgtggggggcctcaagcaaaggactctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaagacaaggtctactactggcatacagggtatgtggggggcctcaagcaaaggactctg 491

                                                                       
Query: 301 aaggaacagatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaggaacagatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctg 551

                                                                       
Query: 361 ccaagaaacaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccaagaaacaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgag 611

                                                                       
Query: 421 caccctttcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 caccctttcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaa 671

                                                                       
Query: 481 atgcggccacgagcaaggcgtgccatgattcgagcacaga-------------------- 520
           ||||||||||||||||||||||||||||||||||||||||                    
Sbjct: 672 atgcggccacgagcaaggcgtgccatgattcgagcacagaagaaggctgagctgcaacaa 731

                                                                       
Query: 521 -agaaggctgaacagcaacagcagaaggctgatggaacaaagggcgaaaagagtgaagca 579
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cagaaggctgaacagcaacagcagaaggctgatggaacaaagggcgaaaagagtgaagca 791

                                
Query: 580 cagggagagagtgcatgaaga 600
           |||||||||||||||||||||
Sbjct: 792 cagggagagagtgcatgaaga 812


>gnl|LJGI|BP038806 similar to UniRef100_A7PLS6 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 523

 Score =  575 bits (290), Expect = e-163
 Identities = 292/293 (99%)
 Strand = Plus / Minus

                                                                       
Query: 308 agatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctgccaagaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agatggccaaagaccctacagaagtaattcgcaaagctattctgcgcatgctgccaagaa 464

                                                                       
Query: 368 acaaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgagcaccctt 427
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acnaactacgtgatgatagggatcgaaaattaaggatctttcctggtagtgagcaccctt 404

                                                                       
Query: 428 tcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaaatgcggc 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcgctgatcggccacttgaacaatatgaaatgcctcccagaagcgtgcgagaaatgcggc 344

                                                                       
Query: 488 cacgagcaaggcgtgccatgattcgagcacagaagaaggctgaacagcaacagcagaagg 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cacgagcaaggcgtgccatgattcgagcacagaagaaggctgaacagcaacagcagaagg 284

                                                                
Query: 548 ctgatggaacaaagggcgaaaagagtgaagcacagggagagagtgcatgaaga 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgatggaacaaagggcgaaaagagtgaagcacagggagagagtgcatgaaga 231