Miyakogusa Predicted Gene

Lj1g3v0514190.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0514190.1 Non Chatacterized Hit- tr|C5XMA2|C5XMA2_SORBI
Putative uncharacterized protein Sb03g023520
OS=Sorghu,32.81,0.88,seg,NULL,CUFF.25932.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598382                                                      78   4e-14
gnl|LJGI|AV776865                                                      52   2e-06

>gnl|LJGI|BW598382 
          Length = 486

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 21  aacggaaccagaagaattttgctcttgtcaagaccagaaaatgaaatcagaagaaggga 79
           |||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 252 aacgaaaccagaagaagtttgctcttgtcaagaccaggaaacgaaaccagaagaaggga 310


>gnl|LJGI|AV776865 
          Length = 565

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 302 ctcttcatcttcatccagaaacagagcatt 331
           ||||||||||||||||||| ||||||||||
Sbjct: 507 ctcttcatcttcatccagacacagagcatt 478