Miyakogusa Predicted Gene
- Lj1g3v0502110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0502110.1 Non Chatacterized Hit- tr|A3C859|A3C859_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75,3e-18,Exostosin,Exostosin-like; EXOSTOSIN (HEPARAN SULFATE
GLYCOSYLTRANSFERASE)-RELATED,NULL,gene.g29754.t1.1
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66320 similar to UniRef100_A7PDM2 Cluster: Chromosome... 854 0.0
gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Tr... 68 1e-10
>gnl|LJGI|TC66320 similar to UniRef100_A7PDM2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 1041
Score = 854 bits (431), Expect = 0.0
Identities = 440/443 (99%)
Strand = Plus / Plus
Query: 356 aagaatggaaacgttcaggagggaagaatcatctgattgtagcccaccatcctaacagca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 aagaatggaaacgttcaggagggaagaatcatctgattgtagcccaccatcctaacagca 92
Query: 416 tgctggatgctagaacgaagttgggctctgctatgctcgtgcttgcagattttggtagat 475
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 93 tgctggatgctagaacgaagttgggctctgctatgctcgtgctgggggattttggtagat 152
Query: 476 atccaaatgaattggcaaacatcaagaaagatataattgccccgtataggcatgtcgtac 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atccaaatgaattggcaaacatcaagaaagatataattgccccgtataggcatgtcgtac 212
Query: 536 gcaccattccaagagctgaatcggcttcatatgaggaacgttccacactggtgtatttcc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gcaccattccaagagctgaatcggcttcatatgaggaacgttccacactggtgtatttcc 272
Query: 596 aaggggcaatatacaggaaagatggaggatttattcgccaagaactgtattacctcctca 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaggggcaatatacaggaaagatggaggatttattcgccaagaactgtattacctcctca 332
Query: 656 aagatgagaaagatgtgcatttcacatttgggagcataggaggaaatgggattaagcaag 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagatgagaaagatgtgcatttcacatttgggagcataggaggaaatgggattaagcaag 392
Query: 716 caagcaaggggatgggcttttccaaattctgtctgaacattgctggagataccccatcgt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caagcaaggggatgggcttttccaaattctgtctgaacattgctggagataccccatcgt 452
Query: 776 ccaatcgcctctttgatgccata 798
|||||||||||||||||||||||
Sbjct: 453 ccaatcgcctctttgatgccata 475
Score = 69.9 bits (35), Expect = 3e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 339 attcttaatgggccagaaagaatggaaacgttcag 373
|||||||||||||||||||||||||||||||||||
Sbjct: 38 attcttaatgggccagaaagaatggaaacgttcag 4
>gnl|LJGI|BW595777 weakly similar to UniRef100_Q5BIZ7 Cluster: Trim47_predicted
protein; n=2; Rattus norvegicus|Rep: Trim47_predicted
protein - Rattus, partial (3%)
Length = 490
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 806 ataagaaccttaggagaaccatatcacaaaagttagctattgtagttggagagc 859
||||||||||| ||||||||| | |||||||| ||||| |||||||||||||||
Sbjct: 285 ataagaaccttgggagaaccacaccacaaaagctagctgttgtagttggagagc 338