Miyakogusa Predicted Gene
- Lj1g3v0488870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0488870.1 Non Chatacterized Hit- tr|A5B781|A5B781_VITVI
Putative uncharacterized protein (Fragment) OS=Vitis
v,43.43,6e-16,UBN2_3,NULL,gene.g29736.t1.1
(909 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75378 228 5e-59
gnl|LJGI|GO033627 similar to UniRef100_Q9HG19 Cluster: PH-regula... 220 1e-56
gnl|LJGI|BP080371 similar to UniRef100_A0CQC9 Cluster: Chromosom... 70 3e-11
gnl|LJGI|TC70969 homologue to UniRef100_Q4C7A3 Cluster: ATP-depe... 70 3e-11
gnl|LJGI|BF177824 58 1e-07
gnl|LJGI|DC595871 weakly similar to UniRef100_A2AL36 Cluster: Ce... 58 1e-07
gnl|LJGI|TC80464 52 6e-06
>gnl|LJGI|TC75378
Length = 2340
Score = 228 bits (115), Expect = 5e-59
Identities = 234/271 (86%), Gaps = 2/271 (0%)
Strand = Plus / Minus
Query: 637 agagtcttctacaccatcagaacttctgagccttcagagtgtctgggttatcagaacgtc 696
||||||||||||||||||||||| ||||||||||||| || ||| |||||||||| ||
Sbjct: 1326 agagtcttctacaccatcagaacatctgagccttcagtgtttcttggttatcagactttc 1267
Query: 697 tggatcttcagaacttcaagtgagctgagtccatatcagagcttgattaacttcagatct 756
|||||||||||| |||| ||||| ||||||||| ||||||| ||| |||||||||| ||
Sbjct: 1266 tggatcttcagagcttctagtga-ctgagtccacatcagagtttgtataacttcagaact 1208
Query: 757 tctgaagcttttctactgttcagattgaacatagagattacgaaagcgttgctagggtca 816
||||||||||||| |||||||| | ||||||| | || | ||||||||||||| ||||
Sbjct: 1207 tctgaagcttttccactgttcatactgaacatggtgaatgcgaaagcgttgcttgggttg 1148
Query: 817 ctctttaagcaaaatgcttctgatttgtgtgagattatattaaggtcagagcctgttaag 876
||||||| || | |||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 1147 ctctttatacacagtgcttctgatttgtgtgagattgagttgaggtcagagcctgtaaat 1088
Query: 877 agcacactcag-aaaacacggtagagtacca 906
||||||||||| |||||||| ||||||||||
Sbjct: 1087 agcacactcagaaaaacacgttagagtacca 1057
Score = 125 bits (63), Expect = 5e-28
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 508 gtgcttaagataagagatgagaaaagcacaccaggattttatcctggttcacttgatgaa 567
||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 2090 gtgctaaagataagagat-agaaaagcacacaaggattttatcctggttcacttgataaa 2032
Query: 568 tcactcaagctagtccagtccacccgt 594
|||||||||||| ||||||||||||||
Sbjct: 2031 tcactcaagctactccagtccacccgt 2005
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 609 tccagcttctgctgtggctgagaatgttag 638
|||||||||||||||||||||||| |||||
Sbjct: 1604 tccagcttctgctgtggctgagaacgttag 1575
>gnl|LJGI|GO033627 similar to UniRef100_Q9HG19 Cluster: PH-regulated protein 1; n=1;
Candida dubliniensis|Rep: PH-regulated protein 1 -
Candida dubliniensis (Yeast), partial (4%)
Length = 744
Score = 220 bits (111), Expect = 1e-56
Identities = 156/171 (91%)
Strand = Plus / Plus
Query: 637 agagtcttctacaccatcagaacttctgagccttcagagtgtctgggttatcagaacgtc 696
|||||||||||||||||||||||||||||||||||||||| | ||| || ||||||||||
Sbjct: 574 agagtcttctacaccatcagaacttctgagccttcagagtctttggattgtcagaacgtc 633
Query: 697 tggatcttcagaacttcaagtgagctgagtccatatcagagcttgattaacttcagatct 756
|||||| | ||| ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 634 tggatcattagagcttcaagtgagctgagtccttatcagagcttgatatacttcagatct 693
Query: 757 tctgaagcttttctactgttcagattgaacatagagattacgaaagcgttg 807
||||||||||||| |||||||||| ||||||| |||| | |||||||||||
Sbjct: 694 tctgaagcttttccactgttcagactgaacatggagaatgcgaaagcgttg 744
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 608 ttccagcttctgctgtggctgagaatgt 635
||||||||||||||||||||||||||||
Sbjct: 295 ttccagcttctgctgtggctgagaatgt 322
>gnl|LJGI|BP080371 similar to UniRef100_A0CQC9 Cluster: Chromosome undetermined
scaffold_24 whole genome shotgun sequence; n=1;
Paramecium, partial (3%)
Length = 345
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 548 atcctggttcacttgatgaatcactcaagctagtccagtccacccgt 594
||||||||||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 1 atcctggttcacttgataaatccctcaagctaatccagtccacccgt 47
>gnl|LJGI|TC70969 homologue to UniRef100_Q4C7A3 Cluster: ATP-dependent Clp protease
proteolytic subunit; n=1; Crocosphaera watsonii WH
8501|Rep: ATP-dependent Clp protease proteolytic subunit
- Crocosphaera watsonii, partial (6%)
Length = 578
Score = 69.9 bits (35), Expect = 3e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 548 atcctggttcacttgatgaatcactcaagctagtccagtccacccgt 594
||||||||||||||||| |||| ||||||||| ||||||||||||||
Sbjct: 527 atcctggttcacttgataaatccctcaagctaatccagtccacccgt 481
>gnl|LJGI|BF177824
Length = 447
Score = 58.0 bits (29), Expect = 1e-07
Identities = 116/141 (82%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 701 tcttcagaacttcaagtgagctgagtccatatcagagcttgattaacttcagatcttctg 760
|||||||||||| |||||| |||| |||| |||||||||| || | ||||||| ||||||
Sbjct: 260 tcttcagaactttaagtgatctgaatccacatcagagctt-atcatcttcagaacttctg 318
Query: 761 aagctttt-ctactgttcagattgaacatagagattacgaaagcgttgctagggtcactc 819
|||| | | |||||||||| |||||||| || | |||||||||||| ||| ||||
Sbjct: 319 aagcatatactactgttcaatcagaacatagtgagtgcgaaagcgttgcgttggttactc 378
Query: 820 tttaagcaaaatgcttctgat 840
||| || |||||||||||||
Sbjct: 379 tttg-gctaaatgcttctgat 398
>gnl|LJGI|DC595871 weakly similar to UniRef100_A2AL36 Cluster: Centrosomal protein 1;
n=3; Mus musculus|Rep: Centrosomal protein 1 - Mus
musculus (Mouse), partial (1%)
Length = 544
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 508 gtgcttaagataagagatgagaaaagcacaccaggattttatcctggt 555
||||| |||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 498 gtgctaaagataagagat-agaanagcacacaaggattttatcctggt 544
>gnl|LJGI|TC80464
Length = 609
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 609 tccagcttctgctgtggctgagaatgttag 638
|||||||||||||||||||||||| |||||
Sbjct: 197 tccagcttctgctgtggctgagaacgttag 168