Miyakogusa Predicted Gene
- Lj1g3v0477780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0477780.1 Non Chatacterized Hit- tr|C0PJV2|C0PJV2_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,57.3,3e-18,seg,NULL,CUFF.25898.1
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60571 similar to UniRef100_A7QI81 Cluster: Chromosome... 1909 0.0
gnl|LJGI|TC78675 similar to UniRef100_A7QI81 Cluster: Chromosome... 801 0.0
gnl|LJGI|GO013867 similar to UniRef100_A7QI81 Cluster: Chromosom... 688 0.0
gnl|LJGI|TC78597 similar to UniRef100_A7QI81 Cluster: Chromosome... 480 e-135
gnl|LJGI|DC593582 similar to UniRef100_A7QI81 Cluster: Chromosom... 216 2e-55
>gnl|LJGI|TC60571 similar to UniRef100_A7QI81 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1242
Score = 1909 bits (963), Expect = 0.0
Identities = 963/963 (100%)
Strand = Plus / Plus
Query: 1 atgcggttcgacgttatgacaggaaggactgtaaacttgacatggtggagtcattctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atgcggttcgacgttatgacaggaaggactgtaaacttgacatggtggagtcattctaaa 70
Query: 61 acggtggctttgatctggctcatctctgccttcttcttctacaccttgttccaaatggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 acggtggctttgatctggctcatctctgccttcttcttctacaccttgttccaaatggcc 130
Query: 121 ctccgcaactcatcagaaaccctttcatcaaattcatctgattctccaaatttaaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctccgcaactcatcagaaaccctttcatcaaattcatctgattctccaaatttaaacact 190
Query: 181 gagcaaagatccaagttatatgacaagatggcgagagatctcgatgagcatggagctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gagcaaagatccaagttatatgacaagatggcgagagatctcgatgagcatggagctgct 250
Query: 241 ttcatgaaacatggtgaaacctctcagtccttgactatttcagatatcttcacagtgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttcatgaaacatggtgaaacctctcagtccttgactatttcagatatcttcacagtgaaa 310
Query: 301 gatggatatgtgacacctgtactaaaggccgcaaatcctccagttcgagctaatatattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gatggatatgtgacacctgtactaaaggccgcaaatcctccagttcgagctaatatattg 370
Query: 361 tatttgagcactgagttctctgtccccatagcggaggctgtcaaaagtatttttagtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tatttgagcactgagttctctgtccccatagcggaggctgtcaaaagtatttttagtcct 430
Query: 421 cactttgagaaagcaatctggtttcagaactctactatgtaccattttagcatgttccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cactttgagaaagcaatctggtttcagaactctactatgtaccattttagcatgttccac 490
Query: 481 gcctctcaccatattgtacctgtacctgccagcaaagaagagatagaagttgaagcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcctctcaccatattgtacctgtacctgccagcaaagaagagatagaagttgaagcatct 550
Query: 541 tctgtgaaagctgttgctgcaatgctttgccctttgaaaatcgttttagacagggtggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tctgtgaaagctgttgctgcaatgctttgccctttgaaaatcgttttagacagggtggtt 610
Query: 601 ttgacttcaactggagtgctcctgggttgctggcaggtaatctcagggacagatcccata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgacttcaactggagtgctcctgggttgctggcaggtaatctcagggacagatcccata 670
Query: 661 accattcgtgctaagttgaagaatgtgcttcctcgtgcaccagagaagcaactttatgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 accattcgtgctaagttgaagaatgtgcttcctcgtgcaccagagaagcaactttatgat 730
Query: 721 gcttctattcttcacactacatttgcaaggcttttgggtccgtcgtcgactaaggaacga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcttctattcttcacactacatttgcaaggcttttgggtccgtcgtcgactaaggaacga 790
Query: 781 cttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaataatcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaataatcag 850
Query: 841 atacatggattcaaggcagtggtgtccgaactctggtacgtggaggaatatgatgtgctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 atacatggattcaaggcagtggtgtccgaactctggtacgtggaggaatatgatgtgctt 910
Query: 901 gcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctcaagagat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctcaagagat 970
Query: 961 tga 963
|||
Sbjct: 971 tga 973
>gnl|LJGI|TC78675 similar to UniRef100_A7QI81 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 804
Score = 801 bits (404), Expect = 0.0
Identities = 407/408 (99%)
Strand = Plus / Plus
Query: 26 ggactgtaaacttgacatggtggagtcattctaaaacggtggctttgatctggctcatct 85
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggactgtaaactcgacatggtggagtcattctaaaacggtggctttgatctggctcatct 60
Query: 86 ctgccttcttcttctacaccttgttccaaatggccctccgcaactcatcagaaacccttt 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgccttcttcttctacaccttgttccaaatggccctccgcaactcatcagaaacccttt 120
Query: 146 catcaaattcatctgattctccaaatttaaacactgagcaaagatccaagttatatgaca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catcaaattcatctgattctccaaatttaaacactgagcaaagatccaagttatatgaca 180
Query: 206 agatggcgagagatctcgatgagcatggagctgctttcatgaaacatggtgaaacctctc 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatggcgagagatctcgatgagcatggagctgctttcatgaaacatggtgaaacctctc 240
Query: 266 agtccttgactatttcagatatcttcacagtgaaagatggatatgtgacacctgtactaa 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtccttgactatttcagatatcttcacagtgaaagatggatatgtgacacctgtactaa 300
Query: 326 aggccgcaaatcctccagttcgagctaatatattgtatttgagcactgagttctctgtcc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggccgcaaatcctccagttcgagctaatatattgtatttgagcactgagttctctgtcc 360
Query: 386 ccatagcggaggctgtcaaaagtatttttagtcctcactttgagaaag 433
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatagcggaggctgtcaaaagtatttttagtcctcactttgagaaag 408
Score = 486 bits (245), Expect = e-136
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 432 agcaatctggtttcagaactctactatgtaccattttagcatgttccacgcctctcacca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agcaatctggtttcagaactctactatgtaccattttagcatgttccacgcctctcacca 619
Query: 492 tattgtacctgtacctgccagcaaagaagagatagaagttgaagcatcttctgtgaaagc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tattgtacctgtacctgccagcaaagaagagatagaagttgaagcatcttctgtgaaagc 679
Query: 552 tgttgctgcaatgctttgccctttgaaaatcgttttagacagggtggttttgacttcaac 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgttgctgcaatgctttgccctttgaaaatcgttttagacagggtggttttgacttcaac 739
Query: 612 tggagtgctcctgggttgctggcaggtaatctcagggacagatcccataaccattcgtgc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tggagtgctcctgggttgctggcaggtaatctcagggacagatcccataaccattcgtgc 799
Query: 672 taagt 676
|||||
Sbjct: 800 taagt 804
>gnl|LJGI|GO013867 similar to UniRef100_A7QI81 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 831
Score = 688 bits (347), Expect = 0.0
Identities = 361/363 (99%), Gaps = 2/363 (0%)
Strand = Plus / Minus
Query: 274 actatttcagatatcttcacagtgaaagatggatatgtgacacctgtactaaaggccgca 333
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 831 actatttcagatatcttcacagtgaaagatggatatgtgacac-tgtactaaaggccgca 773
Query: 334 aatcctccagttcgagctaatatattgtatttgagcactgagttctctgtccccatagcg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aatcctccagttcgagctaatatattgtatttgagcactgagttctctgtccccatagcg 713
Query: 394 gaggctgtcaaaagtatttttagtcctcactttgagaaagcaatctggtttcagaactct 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaggctgtcaaaagtatttttagtcctcactttgagaaagcaatctggtttcagaactct 653
Query: 454 actatgtaccattttagcatgttccacgcctctcaccatattgtacctgtacctgccagc 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 actatgtaccattttagcatgttccacgcctctcaccatattgtacctgtacctgccagc 593
Query: 514 aaagaagagatagaagttgaagcatcttctgtgaaagctgttgctgcaatgctttgccct 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aaagaagagatagaagttgaagcatcttctgtgaaagctgttgctgcaatgctttgccct 533
Query: 574 ttgaaaatcgttttagacagggtggttttgacttcaactggagtgctcctgggttgctgg 633
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttgaaaatcgttttagacagggt-gttttgacttcaactggagtgctcctgggttgctgg 474
Query: 634 cag 636
|||
Sbjct: 473 cag 471
Score = 486 bits (245), Expect = e-136
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 715 tatgatgcttctattcttcacactacatttgcaaggcttttgggtccgtcgtcgactaag 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tatgatgcttctattcttcacactacatttgcaaggcttttgggtccgtcgtcgactaag 411
Query: 775 gaacgacttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaat 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaacgacttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaat 351
Query: 835 aatcagatacatggattcaaggcagtggtgtccgaactctggtacgtggaggaatatgat 894
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aatcagatacacggattcaaggcagtggtgtccgaactctggtacgtggaggaatatgat 291
Query: 895 gtgcttgcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctca 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtgcttgcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctca 231
Query: 955 agagattga 963
|||||||||
Sbjct: 230 agagattga 222
>gnl|LJGI|TC78597 similar to UniRef100_A7QI81 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 755
Score = 480 bits (242), Expect = e-135
Identities = 249/250 (99%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 715 tatgatgcttctattcttcacactacatttgcaaggcttttggg-tccgtcgtcgactaa 773
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 294 tatgatgcttctattcttcacactacatttgcaaggcttttggggtccgtcgtcgactaa 353
Query: 774 ggaacgacttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaa 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggaacgacttgaaacatcagatgatgttcaatttttccatgaacttgttaatcgacttaa 413
Query: 834 taatcagatacatggattcaaggcagtggtgtccgaactctggtacgtggaggaatatga 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 taatcagatacatggattcaaggcagtggtgtccgaactctggtacgtggaggaatatga 473
Query: 894 tgtgcttgcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgtgcttgcccttgcactaaatggaagaatgaacgttcgcaaattcaaacttgggtgctc 533
Query: 954 aagagattga 963
||||||||||
Sbjct: 534 aagagattga 543
>gnl|LJGI|DC593582 similar to UniRef100_A7QI81 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 581
Score = 216 bits (109), Expect = 2e-55
Identities = 115/117 (98%)
Strand = Plus / Plus
Query: 498 acctgtacctgccagcaaagaagagatagaagttgaagcatcttctgtgaaagctgttgc 557
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 457 acctgtacctgccagcaaagaagagatagaagttgaagcatcttctgtgtaagctgttgc 516
Query: 558 tgcaatgctttgccctttgaaaatcgttttagacagggtggttttgacttcaactgg 614
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 517 tgcaatgctttgccctttgaaaatcgttttagacagagtggttttgacttcaactgg 573