Miyakogusa Predicted Gene
- Lj1g3v0476760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0476760.1 Non Chatacterized Hit- tr|I1HCX7|I1HCX7_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,29.47,3e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; SUBFAMILY NOT NAMED,NULL; MYOSIN,NULL;
IQ,NODE_28326_length_1735_cov_56.497406.path2.1
(1680 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57679 similar to UniRef100_A7PMP7 Cluster: Chromosome... 1336 0.0
gnl|LJGI|GO023226 similar to UniRef100_A7QI64 Cluster: Chromosom... 862 0.0
gnl|LJGI|TC72960 weakly similar to UniRef100_A7QI65 Cluster: Chr... 414 e-115
gnl|LJGI|AV779982 similar to UniRef100_A7PMP7 Cluster: Chromosom... 143 4e-33
gnl|LJGI|FS353831 similar to UniRef100_A7Q2T6 Cluster: Chromosom... 125 1e-27
gnl|LJGI|GO031752 weakly similar to UniRef100_A7QI65 Cluster: Ch... 109 6e-23
gnl|LJGI|TC81723 62 1e-08
gnl|LJGI|TC71798 weakly similar to UniRef100_A7QFS7 Cluster: Chr... 62 1e-08
gnl|LJGI|BP048915 56 7e-07
>gnl|LJGI|TC57679 similar to UniRef100_A7PMP7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 832
Score = 1336 bits (674), Expect = 0.0
Identities = 674/674 (100%)
Strand = Plus / Plus
Query: 1 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 218
Query: 61 tcaaatatttcaaaaggaagagagaagcttgttaacaaaaaggaagcagtggttgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcaaatatttcaaaaggaagagagaagcttgttaacaaaaaggaagcagtggttgcttct 278
Query: 121 aatgtgtcggataatggtttggcttttgatccaaccctcactaatattgcaagaaatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aatgtgtcggataatggtttggcttttgatccaaccctcactaatattgcaagaaatgag 338
Query: 181 gaggaccaagaagtggagaatgaagaatctgaaaatcttgcacgtgggaatcaagaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaggaccaagaagtggagaatgaagaatctgaaaatcttgcacgtgggaatcaagaaata 398
Query: 241 gacatcatggaatctgttgaccaagatgcaccacccgatcctgaggtaatcagactggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gacatcatggaatctgttgaccaagatgcaccacccgatcctgaggtaatcagactggag 458
Query: 301 gaagctgcaatacatgcacaagctgctttcaggggttacatggctcgcagggcatatagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gaagctgcaatacatgcacaagctgctttcaggggttacatggctcgcagggcatatagg 518
Query: 361 gccctaaaaggcataataaggttgcaagcacttattcgtgggcatttggttaggagacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gccctaaaaggcataataaggttgcaagcacttattcgtgggcatttggttaggagacaa 578
Query: 421 gctgtcgctacattatgctgtatgcatgggattgtaaagttacaggcacttgttcgtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gctgtcgctacattatgctgtatgcatgggattgtaaagttacaggcacttgttcgtggc 638
Query: 481 gggagagttagacaatctgatgttggatttgcaatccatgagaagtgcaatctatttaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gggagagttagacaatctgatgttggatttgcaatccatgagaagtgcaatctatttaag 698
Query: 541 actctggatggcagacttgttgagtcagttggtgtttccacaaaaatttcaaagcagtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 actctggatggcagacttgttgagtcagttggtgtttccacaaaaatttcaaagcagtct 758
Query: 601 gcaaatactttcgtctgtaagcttctttcttcatcaactacaataatggctctgcacctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gcaaatactttcgtctgtaagcttctttcttcatcaactacaataatggctctgcacctg 818
Query: 661 cagtatgttggcgg 674
||||||||||||||
Sbjct: 819 cagtatgttggcgg 832
>gnl|LJGI|GO023226 similar to UniRef100_A7QI64 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 664
Score = 862 bits (435), Expect = 0.0
Identities = 456/461 (98%), Gaps = 4/461 (0%)
Strand = Plus / Plus
Query: 1 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 267
Query: 61 tcaaatatttcaaaaggaagagagaagcttgttaacaaaaaggaagcagtggttgcttct 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 268 tcaaatatttcaaaaggaagagag---cttgttaacaaaaaggaagcagtggttgcttct 324
Query: 121 aatgtgtcggataatggtttggcttttgatccaaccctcactaatattgcaagaaatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatgtgtcggataatggtttggcttttgatccaaccctcactaatattgcaagaaatgag 384
Query: 181 gaggaccaagaagtggagaatgaagaatctgaaaatcttgcacgtgggaatcaagaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaggaccaagaagtggagaatgaagaatctgaaaatcttgcacgtgggaatcaagaaata 444
Query: 241 gacatcatggaatctgttgaccaagatgcaccacccgatcctgaggtaatcagactggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 gacatcatggaatctgttgaccaagatgcaccacccgatcctgaggtaatcggactggag 504
Query: 301 gaagctgcaatacatgcacaagctgctttcaggggttacatggctcgcagggcatatagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaagctgcaatacatgcacaagctgctttcaggggttacatggctcgcagggcatatagg 564
Query: 361 gccctaaaaggcataataaggttgcaagcacttattcgtgggcatttggttaggagacaa 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 gccctaaaaggcataataaggttgcaagcactta-tcgtgggcatttggttaggagacaa 623
Query: 421 gctgtcgctacattatgctgtatgcatgggattgtaaagtt 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctgtcgctacattatgctgtatgcatgggattgtaaagtt 664
>gnl|LJGI|TC72960 weakly similar to UniRef100_A7QI65 Cluster: Chromosome chr17
scaffold_101, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_101, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 629
Score = 414 bits (209), Expect = e-115
Identities = 224/229 (97%)
Strand = Plus / Plus
Query: 1452 attgccaagttatatggcagcaactgaatctgccaaggcaaagttgcgggcacaagattc 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgccaagttatatggcagcaactgaatctgccaaggcaaagttgcgggcacaagattc 60
Query: 1512 cccgaggttcgagcaagatgtaagtgagagaaatagccctgctgggcgacactctatacc 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccgaggttcgagcaagatgtaagtgagagaaatagccctgctgggcgacactctatacc 120
Query: 1572 atcttcaactaaccacaaaattagttcgcattcacccgggacacggagatcagttcaaac 1631
|||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 121 atcttcaacttaccacccaattagttcgcattcacccgggacccggagatcagttccaac 180
Query: 1632 agatggcagaggggggcatagaaatgaaaggactatatcatcttctaga 1680
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatggcagaggggggcatagaaatgaaaggactatatcatcttctaga 229
>gnl|LJGI|AV779982 similar to UniRef100_A7PMP7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 516
Score = 143 bits (72), Expect = 4e-33
Identities = 117/132 (88%)
Strand = Plus / Plus
Query: 341 tggctcgcagggcatatagggccctaaaaggcataataaggttgcaagcacttattcgtg 400
||||||| || |||| |||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct: 381 tggctcggagagcatttagggctctaaaaggcataataaggtcgcaagcacttatgcgtg 440
Query: 401 ggcatttggttaggagacaagctgtcgctacattatgctgtatgcatgggattgtaaagt 460
|||| |||||||||||||||||||| |||||||||||||||| |||| || || ||||
Sbjct: 441 ggcacttggttaggagacaagctgtaagtacattatgctgtatgtatggaatggtcaagt 500
Query: 461 tacaggcacttg 472
|||| |||||||
Sbjct: 501 tacaagcacttg 512
Score = 111 bits (56), Expect = 1e-23
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 60
||||| |||||||| |||||||||||||||||||||||||| |||||||| ||| ||| |
Sbjct: 45 atgggcaaatcaccaggaaaatggatcaaaactgtactattagggaaaaaatcaaccaga 104
Query: 61 tcaaatatttcaa-aaggaagagagaagcttg 91
||||||||||||| ||||||||||||| ||||
Sbjct: 105 tcaaatatttcaagaaggaagagagaaacttg 136
>gnl|LJGI|FS353831 similar to UniRef100_A7Q2T6 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 669
Score = 125 bits (63), Expect = 1e-27
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 109 gtggttgcttctaatgtgtcggataatggtttggcttttgatccaaccctcactaatatt 168
|||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||| |||
Sbjct: 520 gtggttgcttctaatgtgctggataaaggtttggctttcgatccaaccctcaataagatt 461
Query: 169 gcaagaaatgaggaggaccaagaagtggagaatgaagaa 207
|| |||||||||||||||| |||| ||||||||||||||
Sbjct: 460 gccagaaatgaggaggacctagaaatggagaatgaagaa 422
>gnl|LJGI|GO031752 weakly similar to UniRef100_A7QI65 Cluster: Chromosome chr17
scaffold_101, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_101, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 440
Score = 109 bits (55), Expect = 6e-23
Identities = 106/123 (86%)
Strand = Plus / Plus
Query: 949 gaaaatccacaaagtgttcttgaaaaggttaaacggaacttgagaaagattcataatcct 1008
||||||||||||| || ||||||||||||||||| | |||||||||| ||||||| ||
Sbjct: 173 gaaaatccacaaaatgagcttgaaaaggttaaacgaagcttgagaaaggttcataaccca 232
Query: 1009 gttgttgagaatgctattctgtccgaagttgaatttgagaccgcaaagcagcacttggta 1068
||||||||||||||| ||| ||| |||||||||| |||||| |||||| ||| |||| |
Sbjct: 233 gttgttgagaatgctgttcagtcagaagttgaatctgagactccaaagctgcatttggaa 292
Query: 1069 aag 1071
|||
Sbjct: 293 aag 295
>gnl|LJGI|TC81723
Length = 451
Score = 61.9 bits (31), Expect = 1e-08
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1570 ccatcttcaactaaccacaaaattagttcgcattcacccgggacacggagatcagttcaa 1629
|||||||||||| || |||||| |||||||||||||| |||||| |||| || |||||
Sbjct: 419 ccatcttcaactcacagcaaaatcagttcgcattcacctaggacacagagaccaattcaa 360
Query: 1630 acagatggcagaggggggc 1648
||| ||||| ||||||||
Sbjct: 359 gcaggtggcaaaggggggc 341
>gnl|LJGI|TC71798 weakly similar to UniRef100_A7QFS7 Cluster: Chromosome undetermined
scaffold_89, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_89, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 1625
Score = 61.9 bits (31), Expect = 1e-08
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 103 gaagcagtggttgcttctaatgtgtcggataatggtttggcttttgatccaaccctcact 162
|||||||| ||| |||||||| || ||||||| |||||||||||||||| |||||| |
Sbjct: 1431 gaagcagttgttccttctaatttgctggataataatttggcttttgatccagccctcaat 1490
Query: 163 aatattgcaagaaatgagg 181
|| ||||| ||| ||||||
Sbjct: 1491 aagattgccagacatgagg 1509
>gnl|LJGI|BP048915
Length = 562
Score = 56.0 bits (28), Expect = 7e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 103 gaagcagtggttgcttctaatgtgtcggataatggtttggcttttgatccaaccct 158
|||||||| | |||||||||| || ||||||| ||||||||||||||||| ||||
Sbjct: 405 gaagcagttgatgcttctaatttgctggataatagtttggcttttgatccagccct 350