Miyakogusa Predicted Gene

Lj1g3v0449050.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0449050.1 Non Chatacterized Hit- tr|I1IG18|I1IG18_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,66.67,0.0000000001,seg,NULL,CUFF.25875.1
         (735 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60389 weakly similar to UniRef100_Q9LME0 Cluster: F14...  1328   0.0  

>gnl|LJGI|TC60389 weakly similar to UniRef100_Q9LME0 Cluster: F14D16.2; n=2;
           Arabidopsis thaliana|Rep: F14D16.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (5%)
          Length = 788

 Score = 1328 bits (670), Expect = 0.0
 Identities = 670/670 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagaatatgttacgaggaaagcagatcagttccctttcaagcactgctaggagcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgcagaatatgttacgaggaaagcagatcagttccctttcaagcactgctaggagcttt 178

                                                                       
Query: 61  ttcctcagtggttcacgatgtaatggagctgaaggaaattcatgcacttgtcctgaggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ttcctcagtggttcacgatgtaatggagctgaaggaaattcatgcacttgtcctgaggat 238

                                                                       
Query: 121 gaaacatgtgtatcaagaagacagaggaggaaaaatgaagatttacttgtacagaagcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gaaacatgtgtatcaagaagacagaggaggaaaaatgaagatttacttgtacagaagcca 298

                                                                       
Query: 181 tcttccttagtatccaagaccacatctcaagtgaaaggaaccctggtttcaggaaactcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcttccttagtatccaagaccacatctcaagtgaaaggaaccctggtttcaggaaactcg 358

                                                                       
Query: 241 gcaagttcagcaaatgcgccatgtatccgcaaggctgagagtgttgatcaatcatctgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcaagttcagcaaatgcgccatgtatccgcaaggctgagagtgttgatcaatcatctgct 418

                                                                       
Query: 301 cttgtacaagtcaggtctactttaggtccatcaagtaaatcagatactgtaacatatgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cttgtacaagtcaggtctactttaggtccatcaagtaaatcagatactgtaacatatgca 478

                                                                       
Query: 361 tgtgttgttgatggtgtccagaaccatgctgtgcactcatctcctcttgattctgaacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgtgttgttgatggtgtccagaaccatgctgtgcactcatctcctcttgattctgaacaa 538

                                                                       
Query: 421 ttttatagggcaggtattgcagctgtcaattttctttctgactttgttaataataagttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttttatagggcaggtattgcagctgtcaattttctttctgactttgttaataataagttt 598

                                                                       
Query: 481 ccttcatcagatgggatgggaatacttagccactctaaaaattatgtggttgatgcggcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ccttcatcagatgggatgggaatacttagccactctaaaaattatgtggttgatgcggcc 658

                                                                       
Query: 541 agagccctgcccaacatcagacctgcgagcgtgaaacaaattagaaaggaagattttacc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agagccctgcccaacatcagacctgcgagcgtgaaacaaattagaaaggaagattttacc 718

                                                                       
Query: 601 agtgttcatcctaaaccacctccttctacacatccagggccgtcaaaagctgcaagtagt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agtgttcatcctaaaccacctccttctacacatccagggccgtcaaaagctgcaagtagt 778

                     
Query: 661 tatcatggtg 670
           ||||||||||
Sbjct: 779 tatcatggtg 788