Miyakogusa Predicted Gene
- Lj1g3v0448970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0448970.1 tr|G7LCX9|G7LCX9_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_8g076010 PE=4 SV=1,48.06,3e-19,seg,NULL;
no description,NULL,CUFF.25869.1
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322002 weakly similar to UniRef100_A9U3I4 Cluster: Pr... 232 2e-60
gnl|LJGI|FS336580 weakly similar to UniRef100_Q41645 Cluster: Ex... 180 6e-45
gnl|LJGI|TC73015 similar to UniRef100_A7QNM3 Cluster: Chromosome... 119 2e-26
gnl|LJGI|BP036459 111 5e-24
>gnl|LJGI|FS322002 weakly similar to UniRef100_A9U3I4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(14%)
Length = 682
Score = 232 bits (117), Expect = 2e-60
Identities = 192/217 (88%)
Strand = Plus / Plus
Query: 113 acttggagcctgtctccctcgtctccaagcaattcctctccatcactaaccgcctccaat 172
|||||||| || | ||||| |||||||||||||||||||||||||| |||||| ||| ||
Sbjct: 113 acttggagtctctgtcccttgtctccaagcaattcctctccatcaccaaccgcatccgat 172
Query: 173 tctccctcgccatccacgaccacccactccccttacttccccacctcttccaccggttcc 232
||||||||||| |||||||| ||| ||||||||| || || | |||| ||||| ||| ||
Sbjct: 173 tctccctcgccgtccacgacgacctactccccttcctccctcgcctcctccacaggtacc 232
Query: 233 ccaatctcacctccctcgacctcacgcgcttccacggtgagctcgacgcgcttctcctcc 292
|||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 233 ccaacctcacctccctcgacctcacgcgcttccgcggtgacctcgacgcgcttctcctcc 292
Query: 293 aaatctcccgccaccccttgcgcctcctcacatcgct 329
||||||| || ||||||||||| ||||||||||||
Sbjct: 293 aaatctcgcgtttccccttgcgccgcctcacatcgct 329
>gnl|LJGI|FS336580 weakly similar to UniRef100_Q41645 Cluster: Extensin; n=1; Volvox
carteri|Rep: Extensin - Volvox carteri, partial (6%)
Length = 786
Score = 180 bits (91), Expect = 6e-45
Identities = 181/211 (85%)
Strand = Plus / Plus
Query: 122 ctgtctccctcgtctccaagcaattcctctccatcactaaccgcctccaattctccctcg 181
||||||||||||||||||||||||||||||||||||| |||||| ||| || | ||||||
Sbjct: 233 ctgtctccctcgtctccaagcaattcctctccatcaccaaccgcatccgatccaccctcg 292
Query: 182 ccatccacgaccacccactccccttacttccccacctcttccaccggttccccaatctca 241
||||| ||||||| |||||||||| || || | |||| ||||| |||||||||| ||||
Sbjct: 293 ccatctccgaccacacactccccttcctccctctcctcctccacaggttccccaacctca 352
Query: 242 cctccctcgacctcacgcgcttccacggtgagctcgacgcgcttctcctccaaatctccc 301
|||||||||| |||||| |||| | | | |||||| || ||||| |||||||||| |
Sbjct: 353 cctccctcgagttcacgcacttctatgatttcctcgacacggttctcttccaaatctcgc 412
Query: 302 gccaccccttgcgcctcctcacatcgctcaa 332
|| |||||||||||| |||||||||||||||
Sbjct: 413 gctaccccttgcgccgcctcacatcgctcaa 443
>gnl|LJGI|TC73015 similar to UniRef100_A7QNM3 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1671
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 364 cacgtcgttagagccgaaagtagcaacctccgccagttcctctgcatagttgttgctgct 423
|||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 462 cacgtcgtcggagccgaaagcagcagcctccgccagttcctctgcatagttgttgctgct 403
Query: 424 gaggcggctgaggaggaagg 443
|||||||| |||||||||||
Sbjct: 402 gaggcggcggaggaggaagg 383
>gnl|LJGI|BP036459
Length = 309
Score = 111 bits (56), Expect = 5e-24
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 459 tgttgttcttggtgatggaggaggaaggagagcttggtttcttgtctgggttcaatttgg 518
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 285 tgttgttcttggtgatggaggaggaaggaganttgagtttcttgtctgggttcaatttgg 226
Query: 519 ggatggggaagatttgtaa 537
|||| |||||||||||||
Sbjct: 225 agatgaggaagatttgtaa 207