Miyakogusa Predicted Gene
- Lj1g3v0426840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0426840.1 Non Chatacterized Hit- tr|I3SI98|I3SI98_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,92.09,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
coiled-coil,NULL; seg,NULL; helix ,CUFF.25856.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 1511 0.0
gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 1215 0.0
gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein... 90 2e-17
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom... 60 2e-08
gnl|LJGI|AU089082 homologue to UniRef100_A9TUF1 Cluster: Predict... 58 8e-08
gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome... 58 8e-08
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 58 8e-08
>gnl|LJGI|TC80652 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (63%)
Length = 1194
Score = 1511 bits (762), Expect = 0.0
Identities = 762/762 (100%)
Strand = Plus / Plus
Query: 1 atggaccctcctctcatcaacgactccacattctcctccgctttcgctctcgccgagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggaccctcctctcatcaacgactccacattctcctccgctttcgctctcgccgagatt 128
Query: 61 tggccccgaccaggcggaggagcagatgaacattccaccgtcacccaactcaccgccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tggccccgaccaggcggaggagcagatgaacattccaccgtcacccaactcaccgccgcc 188
Query: 121 gcccgaaatcacggcagcaggatcaagatgaagaacaacaacgactccaccacctccgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gcccgaaatcacggcagcaggatcaagatgaagaacaacaacgactccaccacctccgag 248
Query: 181 gacgattgctccaagaatgattcaggcaataaaaggataagattaggaggaggaggatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gacgattgctccaagaatgattcaggcaataaaaggataagattaggaggaggaggatct 308
Query: 241 actgttgagaatggtggaggtggaggtttgaaagctgcagaagctagttcagtggctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actgttgagaatggtggaggtggaggtttgaaagctgcagaagctagttcagtggctgga 368
Query: 301 agcaacaactctgatgaacaaagcactaagccttcagaatcagagccacctaagcaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agcaacaactctgatgaacaaagcactaagccttcagaatcagagccacctaagcaagac 428
Query: 361 tatattcatgtgagggcaagaagggggcaagctacagatagccacagcatagcagagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tatattcatgtgagggcaagaagggggcaagctacagatagccacagcatagcagagaga 488
Query: 421 gctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttggtccccgggtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttggtccccgggtgt 548
Query: 481 aacaagatgattggtaaagcacttgttctggatgagataattaattacatccagtcgctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aacaagatgattggtaaagcacttgttctggatgagataattaattacatccagtcgctg 608
Query: 541 cagcatcaggttgagttcctatcgatgaagcttgaagcagttaattcaagagccaacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cagcatcaggttgagttcctatcgatgaagcttgaagcagttaattcaagagccaacttg 668
Query: 601 aacccaacaaatgaagggtttccttcaaaagatgttgttacccagccatttgacattgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aacccaacaaatgaagggtttccttcaaaagatgttgttacccagccatttgacattgct 728
Query: 661 ggagtgatatatgaatcacaagcagcaagggggtatgctcagggatcacatcctggatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ggagtgatatatgaatcacaagcagcaagggggtatgctcagggatcacatcctggatgg 788
Query: 721 ctgcatatgcagattggtgggggttttgaaggagcaacgtaa 762
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctgcatatgcagattggtgggggttttgaaggagcaacgtaa 830
>gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (58%)
Length = 828
Score = 1215 bits (613), Expect = 0.0
Identities = 702/730 (96%), Gaps = 15/730 (2%)
Strand = Plus / Plus
Query: 1 atggaccctcctctcatcaacgactccacattctcctccgctttcgctctcgccgagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggaccctcctctcatcaacgactccacattctcctccgctttcgctctcgccgagatt 173
Query: 61 tggccccgaccaggcggaggagcagatgaacattccaccgtcacccaactcaccgccgcc 120
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 174 tggccccgaccaggcggaggag---atgaaaattccaccgtcacccaactcaccgccgcc 230
Query: 121 gcccgaaatcacggcagcaggatcaagatgaagaacaacaacgactccaccacctccgag 180
||||||||||||| | | ||||| ||| ||||||||| |||||||||||||||||
Sbjct: 231 ---cgaaatcacggcaacgg---caagaagaacaacaacaaccactccaccacctccgag 284
Query: 181 gacgattgctccaagaatgattcaggcaataaaaggataagattaggaggaggaggatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gacgattgctccaagaatgattcaggcaataaaaggataagattaggaggaggaggatct 344
Query: 241 actgttgagaatggtggaggtggaggtttgaaagctgcagaagctagttcagtggctgga 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actgttgagaatggtg------gaggtttgaaagctgcagaagctagttcagtggctgga 398
Query: 301 agcaacaactctgatgaacaaagcactaagccttcagaatcagagccacctaagcaagac 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 399 agcaacaactctgatgaacaaagcactaaaccttcagaatcagagccacctaagcaagac 458
Query: 361 tatattcatgtgagggcaagaagggggcaagctacagatagccacagcatagcagagaga 420
||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 459 tatattcatgttagagcaagaagggggcaagctactgatagccacagcatagcagagaga 518
Query: 421 gctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttggtccccgggtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttggtccccgggtgt 578
Query: 481 aacaagatgattggtaaagcacttgttctggatgagataattaattacatccagtcgctg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aacaagatgattggtaaagcacttgttctggatgagataattaattacatccagtcgcta 638
Query: 541 cagcatcaggttgagttcctatcgatgaagcttgaagcagttaattcaagagccaacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 639 cagcatcaggttgagttcctatcgatgaagcttgaagcagttaattcaagagccaacatg 698
Query: 601 aacccaacaaatgaagggtttccttcaaaagatgttgttacccagccatttgacattgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aacccaacaaatgaagggtttccttcaaaagatgttgttacccagccatttgacattgct 758
Query: 661 ggagtgatatatgaatcacaagcagcaagggggtatgctcagggatcacatcctggatgg 720
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ggagtgatatatgaatcacacgcagcaagggggtatgctcagggatcacatcctggatgg 818
Query: 721 ctgcatatgc 730
||||||||||
Sbjct: 819 ctgcatatgc 828
>gnl|LJGI|GO013212 UniRef100_Q0D801 Cluster: Os07g0193800 protein; n=1; Oryza sativa
Japonica Group|Rep: Os07g0193800 protein - Oryza sativa
subsp. japonica (Rice), partial (15%)
Length = 637
Score = 89.7 bits (45), Expect = 2e-17
Identities = 105/125 (84%)
Strand = Plus / Plus
Query: 349 cctaagcaagactatattcatgtgagggcaagaagggggcaagctacagatagccacagc 408
|||||||||||||| || || || || || |||||||| ||||| || ||||| |||||
Sbjct: 504 cctaagcaagactacatacacgtcagagccagaaggggacaagccaccgatagtcacagt 563
Query: 409 atagcagagagagctagaagggaaaagatcagtgagaggatgaaaattcttcaggatttg 468
| || |||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||
Sbjct: 564 ctcgctgagagagccagaagagaaaagatcagtgagagaatgaagattcttcaagattta 623
Query: 469 gtccc 473
|||||
Sbjct: 624 gtccc 628
Score = 58.0 bits (29), Expect = 8e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 atggaccctcctctcatcaacgactccacattctcctccgc 41
||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 255 atggaacctcccctcttcaacgactccacattctcctccgc 295
>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 526
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 383 gggggcaagctacagatagccacagcatagcagagagagctagaagggaaaagatcagtg 442
|||| ||||| ||| |||| |||||| | |||||||||| || ||||||||||| ||||
Sbjct: 129 ggggtcaagcaacaaatagtcacagccttgcagagagagtgaggagggaaaagataagtg 188
Query: 443 agaggatgaa 452
||||||||||
Sbjct: 189 agaggatgaa 198
>gnl|LJGI|AU089082 homologue to UniRef100_A9TUF1 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(8%)
Length = 276
Score = 58.0 bits (29), Expect = 8e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 atggaccctcctctcatcaacgactccacattctcctccgc 41
||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 190 atggaacctcccctcttcaacgactccacattctcctccgc 230
>gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 581
Score = 58.0 bits (29), Expect = 8e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 511 gatgagataattaattacatccagtcgctgcagcatcaggttgagttcctatcgatgaag 570
||||||||||| ||||| || || || || |||| || ||||||||| | || ||||||
Sbjct: 14 gatgagataatcaattatattcaatcacttcagcgccaagttgagttcttgtcaatgaag 73
Query: 571 cttgaagcagttaattcaaga 591
||||||||||| |||||||||
Sbjct: 74 cttgaagcagtaaattcaaga 94
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 58.0 bits (29), Expect = 8e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 364 attcatgtgagggcaagaagggggcaagctacagatagccacagcatagcagagagagct 423
||||||||||| |||||||| || |||||||| |||||||| || | || || |||| |
Sbjct: 60 attcatgtgagagcaagaagaggtcaagctactgatagccatagtcttgcggaaagagtt 119
Query: 424 agaagggaaaagatcagtgagaggatgaa 452
||||||| || |||||||| ||||||||
Sbjct: 120 cgaagggagaaaatcagtgaaaggatgaa 148