Miyakogusa Predicted Gene
- Lj1g3v0426760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0426760.1 Non Chatacterized Hit- tr|I1K1J8|I1K1J8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,84.78,0,CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P,NULL;
P-loop containing nucleoside triphosphate hyd,CUFF.25895.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69915 similar to UniRef100_A7QI09 Cluster: Chromosome... 1070 0.0
gnl|LJGI|TC68680 similar to UniRef100_A7QI09 Cluster: Chromosome... 1041 0.0
gnl|LJGI|TC78746 similar to UniRef100_A7QI09 Cluster: Chromosome... 381 e-105
>gnl|LJGI|TC69915 similar to UniRef100_A7QI09 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 785
Score = 1070 bits (540), Expect = 0.0
Identities = 540/540 (100%)
Strand = Plus / Plus
Query: 577 ttagatggggaacataatggaacaatcaacttaattgagataaattcagctcgtcaggac 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagatggggaacataatggaacaatcaacttaattgagataaattcagctcgtcaggac 60
Query: 637 tcactaaatagatcggtgcttgttcagaaggatgcacgtctcctgcgtgatttacgaata 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcactaaatagatcggtgcttgttcagaaggatgcacgtctcctgcgtgatttacgaata 120
Query: 697 atggcatatttcagacagtgctttcccagtgattcagatatttctacaatcaaggaactt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggcatatttcagacagtgctttcccagtgattcagatatttctacaatcaaggaactt 180
Query: 757 gcacattcgttggcctcccactgtccttatgaagttcccattgcaagcataaagattcaa 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcacattcgttggcctcccactgtccttatgaagttcccattgcaagcataaagattcaa 240
Query: 817 catcttcatcgtgaggtcccaagctctgagatgttctacagtttgaatgctagcattgtt 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcttcatcgtgaggtcccaagctctgagatgttctacagtttgaatgctagcattgtt 300
Query: 877 ggtttagcagttgattctgaaggacctgaaaatttaccttggtgtcttggtcttgggatt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtttagcagttgattctgaaggacctgaaaatttaccttggtgtcttggtcttgggatt 360
Query: 937 gtgaggggtattgacacaatcaaaggtgtgctctatgtgattacacctgtgccacatagt 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgaggggtattgacacaatcaaaggtgtgctctatgtgattacacctgtgccacatagt 420
Query: 997 tctctggataaagtcaacctcttgctacaaggttatatccaaattcccatttgtttattg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctctggataaagtcaacctcttgctacaaggttatatccaaattcccatttgtttattg 480
Query: 1057 caggtccagggatgcatatcgccttacatgtcagcagatgtattgactacaagttagtaa 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caggtccagggatgcatatcgccttacatgtcagcagatgtattgactacaagttagtaa 540
>gnl|LJGI|TC68680 similar to UniRef100_A7QI09 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 785
Score = 1041 bits (525), Expect = 0.0
Identities = 528/529 (99%)
Strand = Plus / Plus
Query: 1 atgggttcctccccttcaccggacatatacatcccagagcagtggtcagaggctgcaggg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgggttcctccccttcaccagacatatacatcccagagcagtggtcagaggctgcaggg 316
Query: 61 tccattgcagacagttcaacgcctcctattactctcatatgtggggccaagaacggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tccattgcagacagttcaacgcctcctattactctcatatgtggggccaagaacggtggg 376
Query: 121 aagacaatcttctcccgctatctcctaaacgtcctcttgcacagatatagcagagtcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagacaatcttctcccgctatctcctaaacgtcctcttgcacagatatagcagagtcgct 436
Query: 181 tatctggatactgatgtaggccaacctgagttcactgctcctgcttttctatcacttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatctggatactgatgtaggccaacctgagttcactgctcctgcttttctatcacttacc 496
Query: 241 attgtccaccaagaaactcctgatataaccattccgtgcctgaaaacaccagagaggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attgtccaccaagaaactcctgatataaccattccgtgcctgaaaacaccagagaggtgc 556
Query: 301 cttttctttggtgatgtttcttcaaagagagatccaacgtcatacttaaattatgtattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttttctttggtgatgtttcttcaaagagagatccaacgtcatacttaaattatgtattt 616
Query: 361 gcgatatatgattattatcgaaaggagtattgctcccttgataaggaagaaaattctcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcgatatatgattattatcgaaaggagtattgctcccttgataaggaagaaaattctcct 676
Query: 421 atgattgacttgcctcttattgtgaatactcctggatgggtgaaaggtgttggttattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgattgacttgcctcttattgtgaatactcctggatgggtgaaaggtgttggttattct 736
Query: 481 gtattagtggacatgttgaaatatatttgtccaacacatgtggttaagt 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtattagtggacatgttgaaatatatttgtccaacacatgtggttaagt 785
>gnl|LJGI|TC78746 similar to UniRef100_A7QI09 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 397
Score = 381 bits (192), Expect = e-105
Identities = 195/196 (99%)
Strand = Plus / Plus
Query: 1 atgggttcctccccttcaccggacatatacatcccagagcagtggtcagaggctgcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atgggttcctccccttcaccggacatatacatcccagagcagtggtcagaggctgcaggg 261
Query: 61 tccattgcagacagttcaacgcctcctattactctcatatgtggggccaagaacggtggg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 262 tccattgcagacagttcaacgcctcctattactctcatatgtggggccaagaactgtggg 321
Query: 121 aagacaatcttctcccgctatctcctaaacgtcctcttgcacagatatagcagagtcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagacaatcttctcccgctatctcctaaacgtcctcttgcacagatatagcagagtcgct 381
Query: 181 tatctggatactgatg 196
||||||||||||||||
Sbjct: 382 tatctggatactgatg 397